BLASTX nr result

ID: Panax21_contig00034943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034943
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47377.1| unknown [Lotus japonicus]                               71   1e-10
ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp....    69   4e-10
emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]    69   4e-10
ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-...    69   5e-10
gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from ...    68   7e-10

>gb|AFK47377.1| unknown [Lotus japonicus]
          Length = 234

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/76 (42%), Positives = 52/76 (68%)
 Frame = +1

Query: 211 QAFVXXXXXXXXXXXAFWVARSVYSVNVIADPAQTLRLILVIEAPILILIFSLFRQSPNQ 390
           +AF+           AFW A S+YS+N++ DP++TL  I ++E PI+IL++S +R++  +
Sbjct: 29  EAFIVNALCALGLALAFWFADSIYSINLVTDPSRTLFFIWILELPIVILLYSRYRRNRRK 88

Query: 391 CS*QYIKAVGRGFLGL 438
           CS  Y++AVGRG LG+
Sbjct: 89  CS--YLRAVGRGILGV 102


>ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335985|gb|EFH66402.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/80 (42%), Positives = 51/80 (63%)
 Frame = +1

Query: 199 IPPLQAFVXXXXXXXXXXXAFWVARSVYSVNVIADPAQTLRLILVIEAPILILIFSLFRQ 378
           I  L AF             FWV  ++Y V++I+DP+ TLRL+ +IE PI+++I+SL R+
Sbjct: 18  ISALGAFSVYLITGLFLAVGFWVIHNIYFVDLISDPSLTLRLLWIIEFPIVVIIYSLLRR 77

Query: 379 SPNQCS*QYIKAVGRGFLGL 438
           +P +CS  Y +AVGR  +GL
Sbjct: 78  NPEKCS--YFRAVGRSIVGL 95


>emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]
          Length = 246

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/61 (50%), Positives = 44/61 (72%)
 Frame = +1

Query: 256 AFWVARSVYSVNVIADPAQTLRLILVIEAPILILIFSLFRQSPNQCS*QYIKAVGRGFLG 435
           +FW   S +S N+I+DP  TL LI V E PI++L++S FR++P +CS  Y +AVGRG LG
Sbjct: 55  SFWATHSFFSTNLISDPVHTLLLIWVFETPIVVLVYSRFRKNPKECS--YWRAVGRGLLG 112

Query: 436 L 438
           +
Sbjct: 113 I 113


>ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus]
           gi|449501593|ref|XP_004161410.1| PREDICTED:
           uncharacterized protein C1450.15-like [Cucumis sativus]
          Length = 225

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/61 (52%), Positives = 47/61 (77%)
 Frame = +1

Query: 256 AFWVARSVYSVNVIADPAQTLRLILVIEAPILILIFSLFRQSPNQCS*QYIKAVGRGFLG 435
           AFW+A  ++S ++I+DP+ TL LILV+++PI+IL++S +R   +QCS  Y KAV RG LG
Sbjct: 35  AFWIAHYIFSTHLISDPSLTLFLILVVQSPIVILLYSRYRTDRHQCS--YFKAVARGLLG 92

Query: 436 L 438
           L
Sbjct: 93  L 93


>gb|AAF18502.1|AC010924_15 ESTs gb|AI992787, gb|T20398 come from this gene [Arabidopsis
           thaliana]
          Length = 270

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/60 (53%), Positives = 47/60 (78%)
 Frame = +1

Query: 259 FWVARSVYSVNVIADPAQTLRLILVIEAPILILIFSLFRQSPNQCS*QYIKAVGRGFLGL 438
           F V R+ YSV++I+DP  TLRL+ +IE PI+++I+SLFR++P +CS  Y +AVGR  +GL
Sbjct: 38  FHVVRNKYSVDLISDPTLTLRLLWIIEFPIVVIIYSLFRRNPEKCS--YFRAVGRSLVGL 95


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