BLASTX nr result

ID: Panax21_contig00034927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034927
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530585.1| nascent polypeptide associated complex alpha...    70   2e-10

>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 687

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
 Frame = +3

Query: 3   EVMMTPIHWRFITGMEFGGAPVPCVANITPTTVRSLLGVLAEALKGRTVRTGPLSVDAMT 182
           E+  TP+ W  ITG+ FGG P+    +ITP     LLG++    +G     G L +D + 
Sbjct: 286 EIGPTPLAWTMITGITFGGDPLN-PPDITPEECIKLLGLVGTESEG-FFSQGKLKLDVLC 343

Query: 183 GALSEPIPXXXXXXXXXXXXXXXXXXXG-CFIANNSSTVSFALVSATREVDRIGEYDWGS 359
               +                      G CF +     +   LVSA   + +I +YDWG+
Sbjct: 344 PLTLDFRKKPANSDLEWMFRRLILYLVGSCFFSGPDMMIPIRLVSAMSNIQKISQYDWGA 403

Query: 360 YNFDYFLMGMRMRSQGLTEVWLGFYPFLL 446
             F  FL GMR ++      + GFYPFLL
Sbjct: 404 ATFSAFLRGMRHKTSECRGTFSGFYPFLL 432


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