BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034917
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi...   353   2e-95
emb|CBI26570.3| unnamed protein product [Vitis vinifera]              346   3e-93
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]   341   9e-92
ref|XP_003610900.1| Pentatricopeptide repeat-containing protein ...   338   9e-91
ref|NP_188439.2| pentatricopeptide repeat-containing protein [Ar...   323   2e-86

>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
            chloroplastic-like [Vitis vinifera]
          Length = 1442

 Score =  353 bits (906), Expect = 2e-95
 Identities = 172/200 (86%), Positives = 187/200 (93%)
 Frame = -2

Query: 754  TASWVFQLAVKRNIYHHDVFRVADKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPE 575
            TASWVFQLAVKR+IY HDVFRVA+KDWGADFRK+SAG+ALVGLTLWLDHMQDASL+G+P 
Sbjct: 1215 TASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQDASLQGYPL 1274

Query: 574  SPKSVVLITGTSEYNQVSLNSTLKAYLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSPF 395
            SPKSVVLITGT+EYN VSLNSTLKA+LWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDS F
Sbjct: 1275 SPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSSF 1334

Query: 394  CLDLELKNSSSLPEENSMHLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALMSDEKR 215
            CLDLELK++ SLPE NSM L+EGC++RRGLVPAFKDITERLG VRPKKF+RLAL+ DEKR
Sbjct: 1335 CLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARLALLPDEKR 1394

Query: 214  DKAIEADIVGRKEKLEKMKK 155
            DK I ADI G KEKLEKMKK
Sbjct: 1395 DKVIRADIEGGKEKLEKMKK 1414


>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  346 bits (887), Expect = 3e-93
 Identities = 172/208 (82%), Positives = 187/208 (89%), Gaps = 8/208 (3%)
 Frame = -2

Query: 754  TASWVFQLAVKRNIYHHDVFRVADKDWGADFRKLSAGAALVGLTLWLDHMQ--------D 599
            TASWVFQLAVKR+IY HDVFRVA+KDWGADFRK+SAG+ALVGLTLWLDHMQ        D
Sbjct: 797  TASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQAKYFYFWQD 856

Query: 598  ASLEGFPESPKSVVLITGTSEYNQVSLNSTLKAYLWEMGSPFLPCKTRSGLLVAKAHSLR 419
            ASL+G+P SPKSVVLITGT+EYN VSLNSTLKA+LWEMGSPFLPCKTRSGLLVAKAHSLR
Sbjct: 857  ASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTRSGLLVAKAHSLR 916

Query: 418  MWLKDSPFCLDLELKNSSSLPEENSMHLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRL 239
            MWLKDS FCLDLELK++ SLPE NSM L+EGC++RRGLVPAFKDITERLG VRPKKF+RL
Sbjct: 917  MWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITERLGDVRPKKFARL 976

Query: 238  ALMSDEKRDKAIEADIVGRKEKLEKMKK 155
            AL+ DEKRDK I ADI G KEKLEKMKK
Sbjct: 977  ALLPDEKRDKVIRADIEGGKEKLEKMKK 1004


>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
          Length = 1494

 Score =  341 bits (875), Expect = 9e-92
 Identities = 172/220 (78%), Positives = 187/220 (85%), Gaps = 20/220 (9%)
 Frame = -2

Query: 754  TASWVFQLAVKRNIYHHDVFRVADKDWGADFRKLSAGAALVGLTLWLDHMQ--------- 602
            TASWVFQLAVKR+IY HDVFRVA+KDWGADFRK+SAG+ALVGLTLWLDHMQ         
Sbjct: 1247 TASWVFQLAVKRSIYRHDVFRVAEKDWGADFRKMSAGSALVGLTLWLDHMQASFLITIFV 1306

Query: 601  -----------DASLEGFPESPKSVVLITGTSEYNQVSLNSTLKAYLWEMGSPFLPCKTR 455
                       DASL+G+P SPKSVVLITGT+EYN VSLNSTLKA+LWEMGSPFLPCKTR
Sbjct: 1307 QLMEEYFYFWQDASLQGYPLSPKSVVLITGTAEYNMVSLNSTLKAFLWEMGSPFLPCKTR 1366

Query: 454  SGLLVAKAHSLRMWLKDSPFCLDLELKNSSSLPEENSMHLIEGCYIRRGLVPAFKDITER 275
            SGLLVAKAHSLRMWLKDS FCLDLELK++ SLPE NSM L+EGC++RRGLVPAFKDITER
Sbjct: 1367 SGLLVAKAHSLRMWLKDSSFCLDLELKDAPSLPESNSMQLMEGCFLRRGLVPAFKDITER 1426

Query: 274  LGLVRPKKFSRLALMSDEKRDKAIEADIVGRKEKLEKMKK 155
            LG VRPKKF+RLAL+ DEKRDK I ADI G KEKLEKMKK
Sbjct: 1427 LGDVRPKKFARLALLPDEKRDKVIRADIEGGKEKLEKMKK 1466


>ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512235|gb|AES93858.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1508

 Score =  338 bits (866), Expect = 9e-91
 Identities = 161/200 (80%), Positives = 184/200 (92%)
 Frame = -2

Query: 754  TASWVFQLAVKRNIYHHDVFRVADKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPE 575
            TASWVFQLA+KR+IY HD+FRVA KDWGADFRKLSAG+ALVGLTLWLDHMQDASL+G+PE
Sbjct: 1257 TASWVFQLAIKRSIYRHDIFRVAQKDWGADFRKLSAGSALVGLTLWLDHMQDASLQGYPE 1316

Query: 574  SPKSVVLITGTSEYNQVSLNSTLKAYLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSPF 395
            SPKSVVLITGT+EYN VSL+STLKA+LWEMGSPFLPCKTR G+LVAKAHSLRMWLKDS F
Sbjct: 1317 SPKSVVLITGTAEYNMVSLDSTLKAFLWEMGSPFLPCKTRHGVLVAKAHSLRMWLKDSSF 1376

Query: 394  CLDLELKNSSSLPEENSMHLIEGCYIRRGLVPAFKDITERLGLVRPKKFSRLALMSDEKR 215
            CLDLELK+S +LP+ NSM LI GC+IRRGLVPAF +ITE+L +V PKKFSRLAL+ D+KR
Sbjct: 1377 CLDLELKDSPNLPKLNSMQLINGCFIRRGLVPAFNEITEKLKVVSPKKFSRLALLPDDKR 1436

Query: 214  DKAIEADIVGRKEKLEKMKK 155
             K ++AD+ GRKEKLEK+KK
Sbjct: 1437 SKVMQADVDGRKEKLEKLKK 1456


>ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
            DEFECTIVE 1270; Flags: Precursor
            gi|9294066|dbj|BAB02023.1| unnamed protein product
            [Arabidopsis thaliana] gi|332642528|gb|AEE76049.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 1440

 Score =  323 bits (829), Expect = 2e-86
 Identities = 159/201 (79%), Positives = 176/201 (87%), Gaps = 1/201 (0%)
 Frame = -2

Query: 754  TASWVFQLAVKRNIYHHDVFRVADKDWGADFRKLSAGAALVGLTLWLDHMQDASLEGFPE 575
            TASWVFQL +KR I+  DVFRVADKDWGADFR+LS GAALV LTLWLDHMQDASLEG+PE
Sbjct: 1220 TASWVFQLGIKRGIFSLDVFRVADKDWGADFRRLSGGAALVALTLWLDHMQDASLEGYPE 1279

Query: 574  SPKSVVLITGTSEYNQVSLNSTLKAYLWEMGSPFLPCKTRSGLLVAKAHSLRMWLKDSPF 395
            SPKSVVLITGT+EYN +SL+ TLKA LWEMGSPFLPCKTR+GLLVAKAHSLRMWLKDSPF
Sbjct: 1280 SPKSVVLITGTAEYNGISLDKTLKACLWEMGSPFLPCKTRTGLLVAKAHSLRMWLKDSPF 1339

Query: 394  CLDLELKNSSSLPEENSMHLIEGCYIRRGLVPAFKDITERL-GLVRPKKFSRLALMSDEK 218
            C DLELK+S SLPE NSM LI+GC+IRRGLVPAF  I ERL G V PKKFSRLAL+ DE 
Sbjct: 1340 CFDLELKDSVSLPESNSMDLIDGCFIRRGLVPAFNHIKERLGGFVSPKKFSRLALLPDEM 1399

Query: 217  RDKAIEADIVGRKEKLEKMKK 155
            R++ I+ DI G ++KLEKMKK
Sbjct: 1400 RERVIKTDIEGHRQKLEKMKK 1420