BLASTX nr result

ID: Panax21_contig00034892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034892
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like ...   128   5e-29
emb|CBI17922.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like ...   127   1e-27
ref|XP_003520194.1| PREDICTED: guanylate-binding protein 4-like ...   123   2e-26
ref|XP_002520972.1| interferon-induced guanylate-binding protein...   120   4e-26

>ref|XP_002275124.1| PREDICTED: guanylate-binding protein 4-like [Vitis vinifera]
          Length = 674

 Score =  128 bits (322), Expect(2) = 5e-29
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -2

Query: 211 SGSFSIDNLRQAFPIVEPDPGHTKLRISRAGLEAIERITTPIAAVGVIGPYRSGKSFLLN 32
           SGS SI+N RQAFPIVEPDPGHTKLR++R GLEAIERITTPIAAV VIGPYRSGKSFLLN
Sbjct: 91  SGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEAIERITTPIAAVAVIGPYRSGKSFLLN 150

Query: 31  QLLSLSCYEG 2
           QLLSLSCYEG
Sbjct: 151 QLLSLSCYEG 160



 Score = 24.3 bits (51), Expect(2) = 5e-29
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
 Frame = -3

Query: 393 TFVDMLVTLRHLQNK----RSMMKICSWVAVFLVLMTFSPSGS 277
           +F+   +T  HL +     RS+M+I  WV  F + +    SGS
Sbjct: 51  SFILPPLTASHLVDSALCIRSVMEISYWVLAFWIFLCLFASGS 93


>emb|CBI17922.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/70 (90%), Positives = 66/70 (94%)
 Frame = -2

Query: 211 SGSFSIDNLRQAFPIVEPDPGHTKLRISRAGLEAIERITTPIAAVGVIGPYRSGKSFLLN 32
           SGS SI+N RQAFPIVEPDPGHTKLR++R GLEAIERITTPIAAV VIGPYRSGKSFLLN
Sbjct: 19  SGSSSIENFRQAFPIVEPDPGHTKLRLAREGLEAIERITTPIAAVAVIGPYRSGKSFLLN 78

Query: 31  QLLSLSCYEG 2
           QLLSLSCYEG
Sbjct: 79  QLLSLSCYEG 88


>ref|XP_003536798.1| PREDICTED: guanylate-binding protein 4-like [Glycine max]
          Length = 601

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/72 (86%), Positives = 65/72 (90%)
 Frame = -2

Query: 217 SPSGSFSIDNLRQAFPIVEPDPGHTKLRISRAGLEAIERITTPIAAVGVIGPYRSGKSFL 38
           +PS S SIDN  QAFPIVEPDPGHTKLR+SR GLEAIE+IT PIAAV VIGPYRSGKSFL
Sbjct: 18  TPSSSSSIDNFHQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFL 77

Query: 37  LNQLLSLSCYEG 2
           LNQLLSLSCYEG
Sbjct: 78  LNQLLSLSCYEG 89


>ref|XP_003520194.1| PREDICTED: guanylate-binding protein 4-like [Glycine max]
          Length = 601

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/72 (86%), Positives = 65/72 (90%)
 Frame = -2

Query: 217 SPSGSFSIDNLRQAFPIVEPDPGHTKLRISRAGLEAIERITTPIAAVGVIGPYRSGKSFL 38
           +PS S SIDN  QAFPIVEPDPGHTKLR+SR GLEAIE+IT PIAAV VIGPYRSGKSFL
Sbjct: 19  TPSSS-SIDNFHQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFL 77

Query: 37  LNQLLSLSCYEG 2
           LNQLLSLSCYEG
Sbjct: 78  LNQLLSLSCYEG 89


>ref|XP_002520972.1| interferon-induced guanylate-binding protein, putative [Ricinus
           communis] gi|223539809|gb|EEF41389.1| interferon-induced
           guanylate-binding protein, putative [Ricinus communis]
          Length = 631

 Score =  120 bits (300), Expect(2) = 4e-26
 Identities = 59/72 (81%), Positives = 63/72 (87%)
 Frame = -2

Query: 217 SPSGSFSIDNLRQAFPIVEPDPGHTKLRISRAGLEAIERITTPIAAVGVIGPYRSGKSFL 38
           S  GS SID+  QAFPI+EPDPGHTKLR++  GLEAI RITTPIAAV VIGPYRSGKSFL
Sbjct: 17  SAYGSLSIDSSHQAFPIIEPDPGHTKLRLASDGLEAIRRITTPIAAVAVIGPYRSGKSFL 76

Query: 37  LNQLLSLSCYEG 2
           LNQLLSLSCYEG
Sbjct: 77  LNQLLSLSCYEG 88



 Score = 22.7 bits (47), Expect(2) = 4e-26
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 339 MKICSWVAVFLVLMTFSPSGS 277
           MKI  WV V L++++ S  GS
Sbjct: 1   MKISYWVLVTLLVLSLSAYGS 21


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