BLASTX nr result

ID: Panax21_contig00034882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034882
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16498.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    84   1e-14
ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    80   3e-13
ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   4e-12
ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    76   5e-12

>emb|CBI16498.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
 Frame = -1

Query: 284 MRTSWADAV---AAENAASGSSDNNVTSGASAPPTKAAYVPPHLRNRXXXXXXXXXPSYS 114
           MR+SWAD+V   AAEN A+GSS +N  + A A PT+ AY+PPHLRN          P+YS
Sbjct: 1   MRSSWADSVVNSAAENVAAGSSASNGVATA-AKPTRGAYIPPHLRN-LTPSSEPPAPAYS 58

Query: 113 GPLSGNDRAGYGGITSASRVAGPRSDYGHQGYSTGSR 3
           GP S NDR+GY G    +R  GPR+D    GYS+G R
Sbjct: 59  GPSSANDRSGYSG----NRWGGPRNDSNQTGYSSGGR 91


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 50/97 (51%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
 Frame = -1

Query: 284 MRTSWADAV---AAENAASGSSDNNVTSGASAPPTKAAYVPPHLRNRXXXXXXXXXPSYS 114
           MR+SWAD+V   AAEN A+GSS +N  + A A PT+ AY+PPHLRN          P+YS
Sbjct: 1   MRSSWADSVVNSAAENVAAGSSASNGVATA-AKPTRGAYIPPHLRN-LTPSSEPPAPAYS 58

Query: 113 GPLSGNDRAGYGGITSASRVAGPRSDYGHQGYSTGSR 3
           GP S NDR+GY G    +R  GPR+D    GYS+G R
Sbjct: 59  GPSSANDRSGYSG----NRWGGPRNDSNQTGYSSGGR 91


>ref|XP_004142160.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Cucumis
           sativus]
          Length = 625

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 48/98 (48%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
 Frame = -1

Query: 284 MRTSWADAVA---AENAASGSSDNNVTSGASAPPTKAAYVPPHLRNRXXXXXXXXXPSYS 114
           MRTSWAD  A   AEN A+GS+ NN ++G +  P ++AYVPPHLRNR          + S
Sbjct: 1   MRTSWADLAASSAAENVAAGSA-NNCSAGTTTAPGRSAYVPPHLRNRTAPADLPAAAN-S 58

Query: 113 GPLSGNDRAGYGGITSASRVAGPRSDYGHQ-GYSTGSR 3
           GP  GNDR+G+ G   +    GPR+DY ++ GYS GSR
Sbjct: 59  GPAVGNDRSGHAG---SRWGGGPRNDYNNRSGYSGGSR 93


>ref|XP_003531232.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 619

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 48/96 (50%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
 Frame = -1

Query: 284 MRTSWADAVA---AENAASGSSDNNVTSGASAPPTKAAYVPPHLRNR-XXXXXXXXXPSY 117
           MRTSWAD  A   AENA  GSS +NV +G++  PT+  YVPPHLRNR          P+Y
Sbjct: 1   MRTSWADLAANSAAENAGPGSSADNVGTGSTLAPTRPVYVPPHLRNRQPAAESPAPAPAY 60

Query: 116 SGPLSGNDRAGYGGITSASRVAGPRSDYGHQGYSTG 9
           SGP SG   +   G  S SR A PR+DY   GY  G
Sbjct: 61  SGPSSGAGSSSGAG-NSGSRYAAPRNDY-RPGYGGG 94


>ref|XP_003524948.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Glycine
           max]
          Length = 614

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 48/96 (50%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
 Frame = -1

Query: 284 MRTSWADAVA---AENAASGSSDNNVTSGASAPPTKAAYVPPHLRNR-XXXXXXXXXPSY 117
           MRTSWAD  A   AENA  GSS NNV +G++  PT+  YVPPHLRNR          P+Y
Sbjct: 1   MRTSWADLAANSAAENAGPGSSANNVGTGSNLAPTRPVYVPPHLRNRQPAAESPAPAPAY 60

Query: 116 SGPLSGNDRAGYGGITSASRVAGPRSDYGHQGYSTG 9
           SGP SG   +G       SR A PR+DY   GY  G
Sbjct: 61  SGPSSGAGNSG-------SRYAAPRNDY-RPGYGGG 88


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