BLASTX nr result

ID: Panax21_contig00034871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034871
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containi...   213   3e-53
emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]   213   3e-53
ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-50
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...   204   1e-50

>ref|XP_003633416.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 551

 Score =  213 bits (542), Expect = 3e-53
 Identities = 105/191 (54%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
 Frame = +2

Query: 80  ESKFRLDLDICSRNRDLSGAISLYEFAISQQNIRLNQNHFNSLLYICSNSITD-STKDSA 256
           E KFR DLD CS+ RDLSGA++L+E A+SQ N RL   HFN+LLY+C+ SI + S+K  A
Sbjct: 12  EGKFRFDLDTCSKRRDLSGAVALFESAVSQ-NFRLIHYHFNALLYLCTISIDEPSSKALA 70

Query: 257 IEYGFRIFDHMLSNKINPSEXXXXXXXXXXXXKGDGDLAFELVKDMKKYGILPKLRSYGP 436
           ++YGFRIFDHM+++ + P+E            K DGDLAFE+V+ M KY + P+LR+YGP
Sbjct: 71  LDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRTYGP 130

Query: 437 ALFCFCKNLEAEKAYLVEENLIEMGLNAEEPELGALLKVSVECGRSQKVYEYLHKMRKVL 616
           AL+ FC NLE EKA+ VEE+++ MG++ EEPEL ALLKVS E GR  KVY YLHK+R  +
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190

Query: 617 RCVGENIVEVL 649
           R V E+  E++
Sbjct: 191 RSVSESTAEII 201


>emb|CAN79022.1| hypothetical protein VITISV_022893 [Vitis vinifera]
          Length = 509

 Score =  213 bits (542), Expect = 3e-53
 Identities = 105/191 (54%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
 Frame = +2

Query: 80  ESKFRLDLDICSRNRDLSGAISLYEFAISQQNIRLNQNHFNSLLYICSNSITD-STKDSA 256
           E KFR DLD CS+ RDLSGA++L+E A+SQ N RL   HFN+LLY+C+ SI + S+K  A
Sbjct: 12  EGKFRFDLDTCSKRRDLSGAVALFESAVSQ-NFRLIHYHFNALLYLCTISIDEPSSKALA 70

Query: 257 IEYGFRIFDHMLSNKINPSEXXXXXXXXXXXXKGDGDLAFELVKDMKKYGILPKLRSYGP 436
           ++YGFRIFDHM+++ + P+E            K DGDLAFE+V+ M KY + P+LR+YGP
Sbjct: 71  LDYGFRIFDHMVNSGVTPNEATITAVARLAAAKSDGDLAFEVVRTMGKYELSPRLRTYGP 130

Query: 437 ALFCFCKNLEAEKAYLVEENLIEMGLNAEEPELGALLKVSVECGRSQKVYEYLHKMRKVL 616
           AL+ FC NLE EKA+ VEE+++ MG++ EEPEL ALLKVS E GR  KVY YLHK+R  +
Sbjct: 131 ALYWFCANLEGEKAWAVEEHMVSMGVHPEEPELAALLKVSAEMGRGDKVYAYLHKLRTAV 190

Query: 617 RCVGENIVEVL 649
           R V E+  E++
Sbjct: 191 RSVSESTAEII 201


>ref|XP_002306233.1| predicted protein [Populus trichocarpa] gi|222849197|gb|EEE86744.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  207 bits (527), Expect = 2e-51
 Identities = 104/192 (54%), Positives = 142/192 (73%), Gaps = 1/192 (0%)
 Frame = +2

Query: 77  PESKFRLDLDICSRNRDLSGAISLYEFAISQQNIRLNQNHFNSLLYICSNSITD-STKDS 253
           PES+F  +L+  S+++DL  AISLY+ AISQ N RLNQ++FN+LLY+CS S+ D STKD 
Sbjct: 16  PESQFSYNLNFYSKSKDLHSAISLYDTAISQ-NTRLNQHNFNTLLYLCSISLNDPSTKDL 74

Query: 254 AIEYGFRIFDHMLSNKINPSEXXXXXXXXXXXXKGDGDLAFELVKDMKKYGILPKLRSYG 433
           +++YGFR+FDHM+SN I P+E            KGDGD AF+LVK++  Y  LP+LR+Y 
Sbjct: 75  SLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVYNELPRLRTYD 134

Query: 434 PALFCFCKNLEAEKAYLVEENLIEMGLNAEEPELGALLKVSVECGRSQKVYEYLHKMRKV 613
           PALFC+C+ LE +KAY VEE++  +G+  EE E+ ALLKVSVE  R ++VYEYL K+RK+
Sbjct: 135 PALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETRREERVYEYLQKLRKM 194

Query: 614 LRCVGENIVEVL 649
           +RCV E   +V+
Sbjct: 195 VRCVREETAKVI 206


>ref|XP_002328164.1| predicted protein [Populus trichocarpa] gi|222837679|gb|EEE76044.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score =  204 bits (520), Expect = 1e-50
 Identities = 103/192 (53%), Positives = 141/192 (73%), Gaps = 1/192 (0%)
 Frame = +2

Query: 77  PESKFRLDLDICSRNRDLSGAISLYEFAISQQNIRLNQNHFNSLLYICSNSITD-STKDS 253
           PES+F  +L+  S+++DL  AISLY+ AISQ N RLNQ++FN+LLY+CS S+ D STKD 
Sbjct: 16  PESQFSYNLNFYSKSKDLHSAISLYDTAISQ-NTRLNQHNFNTLLYLCSISLNDPSTKDL 74

Query: 254 AIEYGFRIFDHMLSNKINPSEXXXXXXXXXXXXKGDGDLAFELVKDMKKYGILPKLRSYG 433
           +++YGFR+FDHM+SN I P+E            KGDGD AF+LVK++  Y  LP+LR+Y 
Sbjct: 75  SLQYGFRVFDHMVSNGIKPNEASITAVARLAAAKGDGDYAFDLVKNIGVYNELPRLRTYD 134

Query: 434 PALFCFCKNLEAEKAYLVEENLIEMGLNAEEPELGALLKVSVECGRSQKVYEYLHKMRKV 613
           PALFC+C+ LE +KAY VEE++  +G+  EE E+ ALLKVSVE  R ++VY YL K+RK+
Sbjct: 135 PALFCYCEKLEGDKAYEVEEHMRRIGVGLEEGEIAALLKVSVETRREERVYGYLQKLRKM 194

Query: 614 LRCVGENIVEVL 649
           +RCV E   +V+
Sbjct: 195 VRCVREETAKVI 206


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  204 bits (519), Expect = 1e-50
 Identities = 105/195 (53%), Positives = 138/195 (70%), Gaps = 3/195 (1%)
 Frame = +2

Query: 74  NPESKFRLDLDICSRNRDLSGAISLYEFAISQQNIRLNQNHFNSLLYICSNSITD-STKD 250
           NPE+KF+ +L+ CS+ +DL GAISLY+ A+S  N RLNQ+HFN+LLY+CSNS+ D S K 
Sbjct: 14  NPETKFQFELNSCSKAKDLRGAISLYDDAVSN-NTRLNQHHFNALLYLCSNSVADPSLKP 72

Query: 251 SAIEYGFRIFDHMLSNKINPSEXXXXXXXXXXXXKGDGDLAFELVKDMKKY--GILPKLR 424
           +A++YGFR F HM +  + P+E            KGD D AFELVK M K     LP+LR
Sbjct: 73  TALDYGFRAFRHMSALAVLPNEATVTAVARLAAAKGDADYAFELVKSMGKNYNNALPRLR 132

Query: 425 SYGPALFCFCKNLEAEKAYLVEENLIEMGLNAEEPELGALLKVSVECGRSQKVYEYLHKM 604
           +Y PALFCFC+ L+A+KAY VEE++  +G++ EE EL ALLKVS  CGR  KVYEYLH++
Sbjct: 133 TYDPALFCFCEMLDADKAYEVEEHMNGVGVSLEEAELAALLKVSARCGRVDKVYEYLHRL 192

Query: 605 RKVLRCVGENIVEVL 649
           R  +RCV E+   V+
Sbjct: 193 RSSVRCVSESTAVVI 207


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