BLASTX nr result

ID: Panax21_contig00034834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034834
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-...   193   2e-47
emb|CBI31031.3| unnamed protein product [Vitis vinifera]              193   2e-47
ref|XP_002523181.1| conserved hypothetical protein [Ricinus comm...   185   6e-45
ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-...   174   1e-41
ref|XP_002867869.1| hypothetical protein ARALYDRAFT_492795 [Arab...   163   2e-38

>ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera]
          Length = 948

 Score =  193 bits (490), Expect = 2e-47
 Identities = 89/128 (69%), Positives = 107/128 (83%)
 Frame = +3

Query: 225 GSPALAVKKTSLTPKAIIHQRFGSNACYKVEEVQESAPNGCPGLSLQQKGPCLYRCSLQL 404
           G+P +  KKT+ TPKAIIHQ+FG  ACYKVEEVQ    NGCPGL++ QKGPCL+RCSLQL
Sbjct: 3   GAPPVVAKKTTHTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSLQL 62

Query: 405 PEISVVSEIFKRKKDAMQSAAEKAIEKLGINPTTNNPSSQEAWDELVSRLSYLFSNEFLT 584
           PE SVVSE FKRKKDA QSAAEKA+ KLG++P  +N   +E WDEL+SRLSYLF++EFL+
Sbjct: 63  PEFSVVSEYFKRKKDAEQSAAEKALRKLGVDPAASNSIVREPWDELISRLSYLFADEFLS 122

Query: 585 TVHPLSGH 608
           ++HPLSGH
Sbjct: 123 SLHPLSGH 130


>emb|CBI31031.3| unnamed protein product [Vitis vinifera]
          Length = 931

 Score =  193 bits (490), Expect = 2e-47
 Identities = 89/128 (69%), Positives = 107/128 (83%)
 Frame = +3

Query: 225 GSPALAVKKTSLTPKAIIHQRFGSNACYKVEEVQESAPNGCPGLSLQQKGPCLYRCSLQL 404
           G+P +  KKT+ TPKAIIHQ+FG  ACYKVEEVQ    NGCPGL++ QKGPCL+RCSLQL
Sbjct: 3   GAPPVVAKKTTHTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSLQL 62

Query: 405 PEISVVSEIFKRKKDAMQSAAEKAIEKLGINPTTNNPSSQEAWDELVSRLSYLFSNEFLT 584
           PE SVVSE FKRKKDA QSAAEKA+ KLG++P  +N   +E WDEL+SRLSYLF++EFL+
Sbjct: 63  PEFSVVSEYFKRKKDAEQSAAEKALRKLGVDPAASNSIVREPWDELISRLSYLFADEFLS 122

Query: 585 TVHPLSGH 608
           ++HPLSGH
Sbjct: 123 SLHPLSGH 130


>ref|XP_002523181.1| conserved hypothetical protein [Ricinus communis]
           gi|223537588|gb|EEF39212.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 970

 Score =  185 bits (469), Expect = 6e-45
 Identities = 86/132 (65%), Positives = 107/132 (81%)
 Frame = +3

Query: 213 MEIQGSPALAVKKTSLTPKAIIHQRFGSNACYKVEEVQESAPNGCPGLSLQQKGPCLYRC 392
           ME +G      +KT+LTPKAII+Q+FG+ ACYKVEEVQES  NGCPGL++ QKGP LYRC
Sbjct: 1   MEARGCAVATARKTNLTPKAIIYQKFGNRACYKVEEVQESIQNGCPGLAIPQKGPSLYRC 60

Query: 393 SLQLPEISVVSEIFKRKKDAMQSAAEKAIEKLGINPTTNNPSSQEAWDELVSRLSYLFSN 572
           SL+LPEI VVS  FK+KKDA Q AAE A+EKLGINP  +NP+ +E WD L+ R++YLFS+
Sbjct: 61  SLELPEIFVVSGTFKKKKDAEQCAAEMALEKLGINPAADNPTEKEPWDALIERMTYLFSD 120

Query: 573 EFLTTVHPLSGH 608
           EFL +++PLSGH
Sbjct: 121 EFLQSLNPLSGH 132


>ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Cucumis sativus]
          Length = 948

 Score =  174 bits (440), Expect = 1e-41
 Identities = 82/123 (66%), Positives = 103/123 (83%)
 Frame = +3

Query: 240 AVKKTSLTPKAIIHQRFGSNACYKVEEVQESAPNGCPGLSLQQKGPCLYRCSLQLPEISV 419
           A +K  LTPKA+IHQ+FGS ACY +EEV E   NGCPGL++ QKG CLYRC+L+LP++SV
Sbjct: 6   AGRKPVLTPKAVIHQKFGSKACYTIEEVHEPPQNGCPGLAIAQKGACLYRCNLELPDVSV 65

Query: 420 VSEIFKRKKDAMQSAAEKAIEKLGINPTTNNPSSQEAWDELVSRLSYLFSNEFLTTVHPL 599
           VS  FKRK+DA QSAAE AIEKLGI+  TN+ +S+EA DELV+R++YLFS+EFL+ +HPL
Sbjct: 66  VSGTFKRKRDAEQSAAELAIEKLGIHTRTNDLTSEEACDELVARINYLFSSEFLSALHPL 125

Query: 600 SGH 608
           SGH
Sbjct: 126 SGH 128


>ref|XP_002867869.1| hypothetical protein ARALYDRAFT_492795 [Arabidopsis lyrata subsp.
           lyrata] gi|297313705|gb|EFH44128.1| hypothetical protein
           ARALYDRAFT_492795 [Arabidopsis lyrata subsp. lyrata]
          Length = 943

 Score =  163 bits (413), Expect = 2e-38
 Identities = 74/120 (61%), Positives = 96/120 (80%)
 Frame = +3

Query: 249 KTSLTPKAIIHQRFGSNACYKVEEVQESAPNGCPGLSLQQKGPCLYRCSLQLPEISVVSE 428
           K + TPKAIIHQ+FG+ A Y+VEEV +S+ +GCPGL++ QKGPCLYRC LQLP+ SVVS 
Sbjct: 6   KHTPTPKAIIHQKFGAKASYRVEEVNDSSQSGCPGLAIPQKGPCLYRCHLQLPDFSVVSN 65

Query: 429 IFKRKKDAMQSAAEKAIEKLGINPTTNNPSSQEAWDELVSRLSYLFSNEFLTTVHPLSGH 608
           +FK+KKD+ QSAAE A+EKLGI P  ++ +  EAWDE+V R+ Y+FS+EFL+  HPL  H
Sbjct: 66  VFKKKKDSEQSAAELALEKLGIRPQNDDLTVDEAWDEIVGRIKYIFSDEFLSAEHPLGAH 125


Top