BLASTX nr result

ID: Panax21_contig00034812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034812
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    77   1e-12
ref|XP_002533338.1| conserved hypothetical protein [Ricinus comm...    75   4e-12
emb|CAI84657.1| hypothetical protein [Nicotiana tabacum]               75   4e-12
ref|XP_002309709.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
emb|CBI24769.3| unnamed protein product [Vitis vinifera]               62   4e-08

>ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Vitis
           vinifera]
          Length = 674

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 53/113 (46%), Positives = 70/113 (61%)
 Frame = -1

Query: 340 VSVMETNCELSLGNETMHPAEPQCTEMETDEIETGSAKNEIVVYTLEKGEASNDNAVFSR 161
           +SV  +N  L  GN T +P +P C EME++    G  K+    ++ E GE SN   VFSR
Sbjct: 54  ISVAGSN-NLHSGNGT-NPKDPLCAEMESNNNGIGHPKDASENFSSENGEGSN--VVFSR 109

Query: 160 EGPLVNEEHPRMFGDGCSCGAAKKLKSRLATSVSELGNTEKVSHAKKLSRQDR 2
           E PLV+++  R  G GCSC + KKLKSR+  + SE G  +KV + KKLSRQDR
Sbjct: 110 EAPLVSKDS-RTSG-GCSC-SPKKLKSRMVVTDSEPGKKDKVGNEKKLSRQDR 159


>ref|XP_002533338.1| conserved hypothetical protein [Ricinus communis]
           gi|223526829|gb|EEF29047.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 626

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = -1

Query: 340 VSVMETNCELSLGNETMHPAEPQCTEMETDEIETGSAKNEI-VVYTLEKGEASNDNAVFS 164
           V V  TN  L +G+E ++     C EME +E ETGS K+EI ++   EKGE SN   VFS
Sbjct: 6   VCVEGTN--LCMGDE-INSENTFCAEMEVEENETGSPKSEIQLLAASEKGEGSN--VVFS 60

Query: 163 REGPLVNEEHPRMFGDGCSCGAAKKLKSRLATSVSELGNTEKVSHAKKLSRQDR 2
           REGPL+++E  R     C    AKKLKS +  + S++G  E   H +KL++QDR
Sbjct: 61  REGPLISKESRRSGVYRCG---AKKLKSHMVITESDIGKKENFGHDRKLTKQDR 111


>emb|CAI84657.1| hypothetical protein [Nicotiana tabacum]
          Length = 621

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
 Frame = -1

Query: 280 EPQCTEMETDEIETGSAKNEIVVYTLEKGEASNDNAVFSREGPLVNEEHPRMF----GDG 113
           E QC EME +  ETG     I   + E GE S+ N VFSRE PLV+++         G G
Sbjct: 16  ESQCFEMEVESCETG-----IPGLSNENGEGSHGNVVFSRESPLVSKDFRSSAIVGGGGG 70

Query: 112 CSCGAAKKLKSRLATSVSELGNTEKVSHAKKLSRQDR 2
           C+CG   KLK+RL++S  E+G  EK  H KKL+RQ+R
Sbjct: 71  CNCGV-NKLKARLSSSDCEVGKNEKSGHEKKLNRQER 106


>ref|XP_002309709.1| predicted protein [Populus trichocarpa] gi|222852612|gb|EEE90159.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/99 (45%), Positives = 59/99 (59%)
 Frame = -1

Query: 298 ETMHPAEPQCTEMETDEIETGSAKNEIVVYTLEKGEASNDNAVFSREGPLVNEEHPRMFG 119
           +  +P E    EMET+E E GS K+EI  ++ E GE S  N VFSRE P ++ E  R+ G
Sbjct: 5   DVFNPEESFTVEMETEENEIGSPKSEIQCFSSEMGEGS--NVVFSREAPHISTE-SRVSG 61

Query: 118 DGCSCGAAKKLKSRLATSVSELGNTEKVSHAKKLSRQDR 2
             CSC +A K+K  +    SE+G+ E     KKLSRQDR
Sbjct: 62  -VCSC-SATKIKPHVVAMESEIGDKENFGQEKKLSRQDR 98


>emb|CBI24769.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/113 (43%), Positives = 64/113 (56%)
 Frame = -1

Query: 340 VSVMETNCELSLGNETMHPAEPQCTEMETDEIETGSAKNEIVVYTLEKGEASNDNAVFSR 161
           +SV  +N  L  GN T +P +P C EME++    G  K+    ++ E GE S  N VFSR
Sbjct: 361 ISVAGSN-NLHSGNGT-NPKDPLCAEMESNNNGIGHPKDASENFSSENGEGS--NVVFSR 416

Query: 160 EGPLVNEEHPRMFGDGCSCGAAKKLKSRLATSVSELGNTEKVSHAKKLSRQDR 2
           E PLV+++  R  G GCSC + KKLKSR+            V + KKLSRQDR
Sbjct: 417 EAPLVSKD-SRTSG-GCSC-SPKKLKSRM------------VGNEKKLSRQDR 454


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