BLASTX nr result

ID: Panax21_contig00034791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034791
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285117.2| PREDICTED: histidine kinase 4-like [Vitis vi...    78   5e-16
ref|XP_002312478.1| histidine kinase cytokinin receptor [Populus...    76   8e-13
gb|ACE63264.1| cytokinin receptor 1A [Populus trichocarpa]             76   8e-13
ref|XP_002314765.1| histidine kinase cytokinin receptor [Populus...    75   4e-12
ref|XP_003518621.1| PREDICTED: histidine kinase 4-like [Glycine ...    68   2e-11

>ref|XP_002285117.2| PREDICTED: histidine kinase 4-like [Vitis vinifera]
          Length = 1003

 Score = 77.8 bits (190), Expect(2) = 5e-16
 Identities = 38/55 (69%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = -2

Query: 160 RKYTFI--NKVWLPKILVLWIMSTVLVSRLIYNMMDADNKERREEVLVSMCDQRA 2
           R YTFI  N+ WLPK LV WIM   + S  +YN MDA NKERREEVLVSMCDQRA
Sbjct: 23  RGYTFIQANRAWLPKFLVFWIMLMAVFSNFVYNKMDAANKERREEVLVSMCDQRA 77



 Score = 31.2 bits (69), Expect(2) = 5e-16
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 297 MGFKMQGHHLVAVRLND 247
           MG KMQ HH VAVRLN+
Sbjct: 1   MGLKMQSHHSVAVRLNE 17


>ref|XP_002312478.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|222852298|gb|EEE89845.1| histidine kinase cytokinin
           receptor [Populus trichocarpa]
          Length = 1007

 Score = 75.9 bits (185), Expect(2) = 8e-13
 Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -2

Query: 160 RKYTFI--NKVWLPKILVLWIMSTVLVSRLIYNMMDADNKERREEVLVSMCDQRA 2
           R YTFI  N+ WLPK+L+LW+M+  L S  IYN MDADNK RR+EVL SMCDQRA
Sbjct: 26  RGYTFIQANRTWLPKVLLLWVMAMALFSLTIYNGMDADNKVRRKEVLGSMCDQRA 80



 Score = 22.3 bits (46), Expect(2) = 8e-13
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -3

Query: 297 MGFKMQG--HHLVAVRLND 247
           M  KMQ   HH VAV++ND
Sbjct: 1   MALKMQQSYHHSVAVKVND 19


>gb|ACE63264.1| cytokinin receptor 1A [Populus trichocarpa]
          Length = 1006

 Score = 75.9 bits (185), Expect(2) = 8e-13
 Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -2

Query: 160 RKYTFI--NKVWLPKILVLWIMSTVLVSRLIYNMMDADNKERREEVLVSMCDQRA 2
           R YTFI  N+ WLPK+L+LW+M+  L S  IYN MDADNK RR+EVL SMCDQRA
Sbjct: 26  RGYTFIQANRTWLPKVLLLWVMAMALFSLTIYNGMDADNKVRRKEVLGSMCDQRA 80



 Score = 22.3 bits (46), Expect(2) = 8e-13
 Identities = 11/19 (57%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
 Frame = -3

Query: 297 MGFKMQG--HHLVAVRLND 247
           M  KMQ   HH VAV++ND
Sbjct: 1   MALKMQQSYHHSVAVKVND 19


>ref|XP_002314765.1| histidine kinase cytokinin receptor [Populus trichocarpa]
           gi|190148365|gb|ACE63265.1| cytokinin receptor 1B
           [Populus trichocarpa] gi|222863805|gb|EEF00936.1|
           histidine kinase cytokinin receptor [Populus
           trichocarpa]
          Length = 1006

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/55 (67%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -2

Query: 160 RKYTFI--NKVWLPKILVLWIMSTVLVSRLIYNMMDADNKERREEVLVSMCDQRA 2
           R YTFI  N+ WLPKIL+LW+M+  L S  IYN MDADN+ RR+EVL SMCDQRA
Sbjct: 26  RGYTFIQANRTWLPKILLLWVMAMALFSLTIYNGMDADNRVRRKEVLSSMCDQRA 80


>ref|XP_003518621.1| PREDICTED: histidine kinase 4-like [Glycine max]
          Length = 988

 Score = 67.8 bits (164), Expect(2) = 2e-11
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = -2

Query: 160 RKYTFI--NKVWLPKILVLWIMSTVLVSRLIYNMMDADNKERREEVLVSMCDQRA 2
           RKYTFI  ++ WLPK L+LWI+   L+S  IY+ MD D K RR+EVL S+CDQRA
Sbjct: 25  RKYTFIQAHRAWLPKFLLLWILLMALISWCIYSKMDDDTKVRRKEVLGSLCDQRA 79



 Score = 25.8 bits (55), Expect(2) = 2e-11
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -3

Query: 297 MGFKMQGHHLVAVRLND 247
           +  KMQ HH VA+RL+D
Sbjct: 3   LSLKMQNHHPVALRLHD 19


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