BLASTX nr result
ID: Panax21_contig00034784
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034784 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298418.1| f-box family protein [Populus trichocarpa] g... 57 2e-06 emb|CBI28933.3| unnamed protein product [Vitis vinifera] 54 1e-05 emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera] 54 1e-05 >ref|XP_002298418.1| f-box family protein [Populus trichocarpa] gi|222845676|gb|EEE83223.1| f-box family protein [Populus trichocarpa] Length = 363 Score = 57.0 bits (136), Expect = 2e-06 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Frame = +1 Query: 19 EDGCSIWVMREYGVTESWTKLFTMDCHRVFKWVADFRKKGDV-IGSKNNYLFSYDPHAKT 195 E CS+WVM+EYGV ESWTKLF ++ + + FR+ +V + ++ L SYDP+ Sbjct: 261 ETSCSVWVMKEYGVGESWTKLFNIEHVEGIQRLVAFRENNEVLLAGEDGELISYDPNTNN 320 Query: 196 IQDYGIPGTTEWWFSNASYVASYTESLYLL 285 D + G + + Y+ ++ ESL LL Sbjct: 321 -WDCKLFGDVD-----SFYLDTFVESLVLL 344 >emb|CBI28933.3| unnamed protein product [Vitis vinifera] Length = 423 Score = 54.3 bits (129), Expect = 1e-05 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = +1 Query: 13 RYEDGCSIWVMREYGVTESWTKLFTMDCHRVFKWVADFRKKGD-VIGSKNNYLFSYDPHA 189 R D C IWVM EYGV SWTK FT + DF G+ V+ +KN L + DP+ Sbjct: 293 RCNDNCDIWVMDEYGVASSWTKRFTFCLDVEILILLDFLDNGEVVVQNKNGGLVACDPNG 352 Query: 190 KTIQDYGIPG 219 I+D + G Sbjct: 353 GKIRDLKVAG 362 >emb|CAN68677.1| hypothetical protein VITISV_041940 [Vitis vinifera] Length = 485 Score = 54.3 bits (129), Expect = 1e-05 Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 1/70 (1%) Frame = +1 Query: 13 RYEDGCSIWVMREYGVTESWTKLFTMDCHRVFKWVADFRKKGD-VIGSKNNYLFSYDPHA 189 R D C IWVM EYGV SWTK FT + DF G+ V+ +KN L + DP+ Sbjct: 355 RCNDNCDIWVMDEYGVASSWTKRFTFCLDVEILILLDFLDNGEVVVQNKNGGLVACDPNG 414 Query: 190 KTIQDYGIPG 219 I+D + G Sbjct: 415 GKIRDLKVAG 424