BLASTX nr result
ID: Panax21_contig00034770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00034770
(457 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002317551.1| predicted protein [Populus trichocarpa] gi|2... 44 5e-08
ref|XP_002316941.1| predicted protein [Populus trichocarpa] gi|2... 46 5e-08
ref|XP_002528887.1| S-locus-specific glycoprotein S6 precursor, ... 45 7e-08
ref|XP_002280379.2| PREDICTED: uncharacterized protein LOC100262... 40 8e-08
emb|CBI20460.3| unnamed protein product [Vitis vinifera] 40 9e-08
>ref|XP_002317551.1| predicted protein [Populus trichocarpa] gi|222860616|gb|EEE98163.1|
predicted protein [Populus trichocarpa]
Length = 777
Score = 43.9 bits (102), Expect(3) = 5e-08
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +1
Query: 334 LNQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
LN L AWK F E + LE+VD I+E+ NQNEV R I IGL
Sbjct: 671 LNLLGHAWKLFKEGRALELVDDLIVETCNQNEVTRSIHIGL 711
Score = 36.2 bits (82), Expect(3) = 5e-08
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI++GK+ R F H H NLLGH
Sbjct: 648 FGVLVLEIVSGKRNRGFHHPGHQLNLLGH 676
Score = 20.8 bits (42), Expect(3) = 5e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 165 KSDVYSFGV 191
KSDV+SFGV
Sbjct: 642 KSDVFSFGV 650
>ref|XP_002316941.1| predicted protein [Populus trichocarpa] gi|222860006|gb|EEE97553.1|
predicted protein [Populus trichocarpa]
Length = 755
Score = 45.8 bits (107), Expect(3) = 5e-08
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI++GKK R F H DHNHNLLGH
Sbjct: 651 FGVLVLEIVSGKKNRGFYHPDHNHNLLGH 679
Score = 34.3 bits (77), Expect(3) = 5e-08
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 337 NQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
N L AWK +NE + LE++D I +S + +E+ R IQ+GL
Sbjct: 675 NLLGHAWKLWNEGRPLELMDITIDDSSSLSEILRHIQVGL 714
Score = 20.8 bits (42), Expect(3) = 5e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 165 KSDVYSFGV 191
KSDV+SFGV
Sbjct: 645 KSDVFSFGV 653
>ref|XP_002528887.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus
communis] gi|223531686|gb|EEF33511.1| S-locus-specific
glycoprotein S6 precursor, putative [Ricinus communis]
Length = 759
Score = 45.4 bits (106), Expect(3) = 7e-08
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI+ GKK R F H DHNHNLLGH
Sbjct: 632 FGVLVLEIVNGKKNRGFFHPDHNHNLLGH 660
Score = 34.3 bits (77), Expect(3) = 7e-08
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 337 NQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
N L AWK + E+K LE+VD+ L+SY E+ R I +GL
Sbjct: 656 NLLGHAWKLWIEEKALELVDK-TLDSYALPEILRCIHVGL 694
Score = 20.8 bits (42), Expect(3) = 7e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 165 KSDVYSFGV 191
KSDV+SFGV
Sbjct: 626 KSDVFSFGV 634
>ref|XP_002280379.2| PREDICTED: uncharacterized protein LOC100262430 [Vitis vinifera]
Length = 2422
Score = 40.4 bits (93), Expect(3) = 8e-08
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI+TGK+ R F+H DH NLLGH
Sbjct: 721 FGVLVLEIVTGKRNRGFNHPDHALNLLGH 749
Score = 38.9 bits (89), Expect(3) = 8e-08
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 325 DELLNQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
D LN L AW + E K LE++D + +S NQ+EV R + +GL
Sbjct: 741 DHALNLLGHAWTLYMEGKPLELIDASMGDSCNQSEVLRALNVGL 784
Score = 20.8 bits (42), Expect(3) = 8e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 165 KSDVYSFGV 191
KSDV+SFGV
Sbjct: 715 KSDVFSFGV 723
Score = 40.0 bits (92), Expect(3) = 8e-06
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI++GK+ R F+H DH+ NLLGH
Sbjct: 1521 FGVLVLEIVSGKRNRGFNHPDHDLNLLGH 1549
Score = 31.2 bits (69), Expect(3) = 8e-06
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 325 DELLNQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
D LN L AW F ED+ E +D + N +EV R I +GL
Sbjct: 1541 DHDLNLLGHAWTLFIEDRSSEFIDASMGNICNLSEVLRSINLGL 1584
Score = 21.9 bits (45), Expect(3) = 8e-06
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 141 KALYCT*SKSDVYSFGV 191
+ LY T KSDV+SFGV
Sbjct: 1509 EGLYST--KSDVFSFGV 1523
>emb|CBI20460.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 40.4 bits (93), Expect(3) = 9e-08
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 182 FRCLVIEIITGKKIRCFDHQDHNHNLLGH 268
F LV+EI+TGK+ R F+H DH NLLGH
Sbjct: 528 FGVLVLEIVTGKRNRGFNHPDHALNLLGH 556
Score = 38.9 bits (89), Expect(3) = 9e-08
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 325 DELLNQLF*AWKSFNEDKLLEVVDRGILESYNQNEVFRVIQIGL 456
D LN L AW + E K LE++D + +S NQ+EV R + +GL
Sbjct: 548 DHALNLLGHAWTLYMEGKPLELIDASMGDSCNQSEVLRALNVGL 591
Score = 20.8 bits (42), Expect(3) = 9e-08
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +3
Query: 165 KSDVYSFGV 191
KSDV+SFGV
Sbjct: 522 KSDVFSFGV 530