BLASTX nr result

ID: Panax21_contig00034730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034730
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311598.1| predicted protein [Populus trichocarpa] gi|2...    50   1e-12
ref|XP_002315795.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-12
ref|XP_003628373.1| Cullin 3-like protein [Medicago truncatula] ...    50   4e-12
ref|XP_002275251.1| PREDICTED: cullin-3A [Vitis vinifera]              50   8e-12
ref|XP_003551967.1| PREDICTED: cullin-3A-like [Glycine max]            49   8e-12

>ref|XP_002311598.1| predicted protein [Populus trichocarpa] gi|222851418|gb|EEE88965.1|
           predicted protein [Populus trichocarpa]
          Length = 732

 Score = 50.4 bits (119), Expect(2) = 1e-12
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +1

Query: 478 LYQLLVSTMTSHLKEIAKSIDAAQGPSFLEE 570
           LY  LV+TMTSHLKEI+KSI+AAQG SFLEE
Sbjct: 68  LYNGLVATMTSHLKEISKSIEAAQGDSFLEE 98



 Score = 47.4 bits (111), Expect(2) = 1e-12
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +3

Query: 420 FRNAYNMVLHKFGEKLYSGLVST 488
           +RNAYNMVLHKFGEKLY+GLV+T
Sbjct: 53  YRNAYNMVLHKFGEKLYNGLVAT 75


>ref|XP_002315795.1| predicted protein [Populus trichocarpa] gi|222864835|gb|EEF01966.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 48.9 bits (115), Expect(2) = 4e-12
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = +1

Query: 478 LYQLLVSTMTSHLKEIAKSIDAAQGPSFLEE 570
           LY  LV+TMTSHL+EI+KS++AAQG SFLEE
Sbjct: 68  LYNGLVATMTSHLREISKSVEAAQGDSFLEE 98



 Score = 47.4 bits (111), Expect(2) = 4e-12
 Identities = 20/23 (86%), Positives = 23/23 (100%)
 Frame = +3

Query: 420 FRNAYNMVLHKFGEKLYSGLVST 488
           +RNAYNMVLHKFGEKLY+GLV+T
Sbjct: 53  YRNAYNMVLHKFGEKLYNGLVAT 75


>ref|XP_003628373.1| Cullin 3-like protein [Medicago truncatula]
           gi|355522395|gb|AET02849.1| Cullin 3-like protein
           [Medicago truncatula]
          Length = 731

 Score = 50.1 bits (118), Expect(2) = 4e-12
 Identities = 25/31 (80%), Positives = 28/31 (90%)
 Frame = +1

Query: 478 LYQLLVSTMTSHLKEIAKSIDAAQGPSFLEE 570
           LY  LV+TMT+HLKEIAKSI+AAQG SFLEE
Sbjct: 67  LYSGLVATMTAHLKEIAKSIEAAQGGSFLEE 97



 Score = 46.2 bits (108), Expect(2) = 4e-12
 Identities = 19/23 (82%), Positives = 23/23 (100%)
 Frame = +3

Query: 420 FRNAYNMVLHKFGEKLYSGLVST 488
           +RNAYNMVLHKFG++LYSGLV+T
Sbjct: 52  YRNAYNMVLHKFGDRLYSGLVAT 74


>ref|XP_002275251.1| PREDICTED: cullin-3A [Vitis vinifera]
          Length = 733

 Score = 49.7 bits (117), Expect(2) = 8e-12
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = +3

Query: 420 FRNAYNMVLHKFGEKLYSGLVST 488
           +RNAYNMVLHKFGEKLYSGLVST
Sbjct: 53  YRNAYNMVLHKFGEKLYSGLVST 75



 Score = 45.4 bits (106), Expect(2) = 8e-12
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 478 LYQLLVSTMTSHLKEIAKSIDAAQGPSFLEE 570
           LY  LVSTMTSHLK+I+K I+AAQG  FLEE
Sbjct: 68  LYSGLVSTMTSHLKDISKFIEAAQGGLFLEE 98


>ref|XP_003551967.1| PREDICTED: cullin-3A-like [Glycine max]
          Length = 732

 Score = 48.5 bits (114), Expect(2) = 8e-12
 Identities = 21/23 (91%), Positives = 23/23 (100%)
 Frame = +3

Query: 420 FRNAYNMVLHKFGEKLYSGLVST 488
           +RNAYNMVLHKFGEKLYSGLV+T
Sbjct: 53  YRNAYNMVLHKFGEKLYSGLVAT 75



 Score = 46.6 bits (109), Expect(2) = 8e-12
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +1

Query: 478 LYQLLVSTMTSHLKEIAKSIDAAQGPSFLEE 570
           LY  LV+TMT HLK+IA+S++AAQG SFLEE
Sbjct: 68  LYSGLVATMTGHLKDIAQSVEAAQGGSFLEE 98


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