BLASTX nr result

ID: Panax21_contig00034726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034726
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   115   3e-24
emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]   115   3e-24
ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74...   108   6e-22
emb|CBI15248.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74...   103   1e-20

>ref|XP_002274899.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Vitis vinifera]
          Length = 443

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/112 (54%), Positives = 79/112 (70%)
 Frame = +1

Query: 130 MLDGSSFLIARELPSACEQECRWSYYGFHVIELSDGKCRFEIGDKIDLGKSLEQLEFLKG 309
           ML+G S+LI+R+LP+ACEQE +W Y  F VIELS+ K   E G+ + L K  +  +  + 
Sbjct: 1   MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDVGLRKFSKPSDGHET 60

Query: 310 EDNLMVLHELSLVQADQSDNQRHRGDQSDSSSLIHQIGRDLSINCLLRCSRS 465
           E+ +  LH+LSL QA+QS+     GDQSD SSLI QIGRD SINCLL+CSRS
Sbjct: 61  EETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRS 112


>emb|CAN67279.1| hypothetical protein VITISV_022021 [Vitis vinifera]
          Length = 1318

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/112 (54%), Positives = 79/112 (70%)
 Frame = +1

Query: 130 MLDGSSFLIARELPSACEQECRWSYYGFHVIELSDGKCRFEIGDKIDLGKSLEQLEFLKG 309
           ML+G S+LI+R+LP+ACEQE +W Y  F VIELS+ K   E G+ + L K  +  +  + 
Sbjct: 1   MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDGEDVGLRKFSKPSDGHET 60

Query: 310 EDNLMVLHELSLVQADQSDNQRHRGDQSDSSSLIHQIGRDLSINCLLRCSRS 465
           E+ +  LH+LSL QA+QS+     GDQSD SSLI QIGRD SINCLL+CSRS
Sbjct: 61  EETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRS 112


>ref|XP_003527067.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/112 (50%), Positives = 78/112 (69%)
 Frame = +1

Query: 130 MLDGSSFLIARELPSACEQECRWSYYGFHVIELSDGKCRFEIGDKIDLGKSLEQLEFLKG 309
           ML+G +FL++R+LPS+CEQE RW Y  F V+EL+  K + E+ ++  L KS +  +  + 
Sbjct: 1   MLEGPTFLVSRDLPSSCEQETRWIYNSFCVMELASNKRQLELEEEAVLTKSCKLSDAPEE 60

Query: 310 EDNLMVLHELSLVQADQSDNQRHRGDQSDSSSLIHQIGRDLSINCLLRCSRS 465
            +  M    LSL   +Q+++Q H  DQSDSSSLI Q+GRD+SINCLLRCSRS
Sbjct: 61  GETKMNFQNLSL-SVNQANDQNHSSDQSDSSSLIFQLGRDISINCLLRCSRS 111


>emb|CBI15248.3| unnamed protein product [Vitis vinifera]
          Length = 482

 Score =  105 bits (262), Expect = 4e-21
 Identities = 58/112 (51%), Positives = 73/112 (65%)
 Frame = +1

Query: 130 MLDGSSFLIARELPSACEQECRWSYYGFHVIELSDGKCRFEIGDKIDLGKSLEQLEFLKG 309
           ML+G S+LI+R+LP+ACEQE +W Y  F VIELS+ K   E G+                
Sbjct: 66  MLEGPSYLISRDLPNACEQESKWIYNTFLVIELSNSKRPLEDGE---------------- 109

Query: 310 EDNLMVLHELSLVQADQSDNQRHRGDQSDSSSLIHQIGRDLSINCLLRCSRS 465
           ++ +  LH+LSL QA+QS+     GDQSD SSLI QIGRD SINCLL+CSRS
Sbjct: 110 DETMQGLHDLSLSQANQSNTHHDTGDQSDLSSLISQIGRDNSINCLLQCSRS 161


>ref|XP_003523035.1| PREDICTED: F-box/kelch-repeat protein At1g74510-like [Glycine max]
          Length = 441

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/112 (48%), Positives = 77/112 (68%)
 Frame = +1

Query: 130 MLDGSSFLIARELPSACEQECRWSYYGFHVIELSDGKCRFEIGDKIDLGKSLEQLEFLKG 309
           ML+G +FL++R++ S+CEQE RW Y  F V+EL+  K R E+ ++  L KS +  +  + 
Sbjct: 1   MLEGPTFLVSRDILSSCEQETRWIYNSFCVMELASNKRRLELEEEAVLTKSCKLSDAPEK 60

Query: 310 EDNLMVLHELSLVQADQSDNQRHRGDQSDSSSLIHQIGRDLSINCLLRCSRS 465
            +    + +LSL   +Q++ Q H  DQSDSSSLI Q+GRD+SINCLLRCSRS
Sbjct: 61  GETKKSIQDLSL-SVNQANAQNHSSDQSDSSSLIFQLGRDISINCLLRCSRS 111


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