BLASTX nr result

ID: Panax21_contig00034714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034714
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis ...   118   6e-25
emb|CAN70347.1| hypothetical protein VITISV_012579 [Vitis vinifera]   116   2e-24
ref|XP_002520865.1| Transcription factor RF2b, putative [Ricinus...    98   8e-19
ref|XP_002319969.1| predicted protein [Populus trichocarpa] gi|2...    93   2e-17
ref|XP_002319876.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_002280180.1| PREDICTED: transcription factor RF2b [Vitis vinifera]
          Length = 359

 Score =  118 bits (295), Expect = 6e-25
 Identities = 61/105 (58%), Positives = 77/105 (73%)
 Frame = -1

Query: 448 QEVERLRVATGEMASHSDAYDLGIHHLPYNQSAFFPQQPQPGPSNSLNEQMLTQFYSLQS 269
           +EVERL++ATGE+ + SDAY+LG+HH+PY QS+FF  Q QPGPS S N QM  QF+   S
Sbjct: 242 KEVERLKIATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQM-PQFHPFPS 300

Query: 268 SISNQQHHMLAAAHADVLSETLQQQDPLGRFQGLDISHRGSHLVK 134
           ++      +L AAH++ LS+ L QQDPLGR QGLDIS RG  LVK
Sbjct: 301 NMLTHHQPLLGAAHSNALSDML-QQDPLGRLQGLDISSRGPSLVK 344


>emb|CAN70347.1| hypothetical protein VITISV_012579 [Vitis vinifera]
          Length = 412

 Score =  116 bits (291), Expect = 2e-24
 Identities = 60/105 (57%), Positives = 76/105 (72%)
 Frame = -1

Query: 448 QEVERLRVATGEMASHSDAYDLGIHHLPYNQSAFFPQQPQPGPSNSLNEQMLTQFYSLQS 269
           +EVERL++ATGE+ + SDAY+LG+HH+PY QS+FF  Q QPGPS S N QM  QF+   S
Sbjct: 295 KEVERLKIATGEIMTSSDAYNLGMHHVPYTQSSFFSHQSQPGPSESQNIQM-PQFHPFPS 353

Query: 268 SISNQQHHMLAAAHADVLSETLQQQDPLGRFQGLDISHRGSHLVK 134
           ++      +L  AH++ LS+ L QQDPLGR QGLDIS RG  LVK
Sbjct: 354 NMLTHHQPLLGVAHSNALSDML-QQDPLGRLQGLDISSRGPSLVK 397


>ref|XP_002520865.1| Transcription factor RF2b, putative [Ricinus communis]
           gi|223539996|gb|EEF41574.1| Transcription factor RF2b,
           putative [Ricinus communis]
          Length = 355

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/105 (49%), Positives = 69/105 (65%)
 Frame = -1

Query: 448 QEVERLRVATGEMASHSDAYDLGIHHLPYNQSAFFPQQPQPGPSNSLNEQMLTQFYSLQS 269
           +EVERL+ ATGEM + +D+Y LG++H+PY QS+FFP Q QP P N+ N QM  QF+  QS
Sbjct: 239 KEVERLKFATGEMMTPTDSYHLGMNHMPYTQSSFFPPQSQPRPVNTQNMQM-PQFHPFQS 297

Query: 268 SISNQQHHMLAAAHADVLSETLQQQDPLGRFQGLDISHRGSHLVK 134
           ++      + A +H+    E L   DPLGR QGLDI  R + LVK
Sbjct: 298 NMLTSHQAIAAPSHSHAFPEML-PLDPLGRLQGLDIGSRSTVLVK 341


>ref|XP_002319969.1| predicted protein [Populus trichocarpa] gi|222858345|gb|EEE95892.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 51/105 (48%), Positives = 70/105 (66%)
 Frame = -1

Query: 448 QEVERLRVATGEMASHSDAYDLGIHHLPYNQSAFFPQQPQPGPSNSLNEQMLTQFYSLQS 269
           +EV RL++ATGEM S SD+Y+LG+H +P+  S FFP   QPGP+   N Q L  F    S
Sbjct: 226 KEVGRLKIATGEMLSPSDSYNLGMHQMPFTPSNFFPLPSQPGPAGHPNMQ-LPSFTHSPS 284

Query: 268 SISNQQHHMLAAAHADVLSETLQQQDPLGRFQGLDISHRGSHLVK 134
           S+S +  H +    +  LS+ + Q DP+GR QGLDIS++GSH+VK
Sbjct: 285 SMSTRHIHQV---DSQSLSDYM-QNDPIGRLQGLDISNKGSHIVK 325


>ref|XP_002319876.1| predicted protein [Populus trichocarpa] gi|222858252|gb|EEE95799.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 52/105 (49%), Positives = 73/105 (69%)
 Frame = -1

Query: 448 QEVERLRVATGEMASHSDAYDLGIHHLPYNQSAFFPQQPQPGPSNSLNEQMLTQFYSLQS 269
           +EVERL+ ATGE+ + +D+Y+LGI H+PYN S     +P+PG  ++LN Q + QF+ LQS
Sbjct: 203 KEVERLKFATGEIMTPTDSYNLGIQHIPYNHSPLVSPRPRPGSVDALNIQ-IPQFHPLQS 261

Query: 268 SISNQQHHMLAAAHADVLSETLQQQDPLGRFQGLDISHRGSHLVK 134
           ++S +Q   +AA+H+  LSE L  QDPL   QG DIS R S LV+
Sbjct: 262 NLSPRQPG-IAASHSHALSEML-PQDPLRWLQGFDISSRSSVLVR 304


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