BLASTX nr result

ID: Panax21_contig00034710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034710
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509745.1| conserved hypothetical protein [Ricinus comm...   143   2e-32
ref|XP_002299522.1| predicted protein [Populus trichocarpa] gi|2...   138   7e-31
ref|XP_002276504.1| PREDICTED: CASP-like protein At4g11655 [Viti...   127   3e-29
emb|CAN82263.1| hypothetical protein VITISV_009281 [Vitis vinifera]   127   3e-29
ref|NP_974535.1| uncharacterized protein [Arabidopsis thaliana] ...   108   7e-22

>ref|XP_002509745.1| conserved hypothetical protein [Ricinus communis]
           gi|223549644|gb|EEF51132.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 204

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/125 (60%), Positives = 91/125 (72%), Gaps = 4/125 (3%)
 Frame = -2

Query: 550 SLSAPSTTKKKGEEHFIFHDYPELLYCFITTILAFIYSAHQLFKGVCDIAYRGVLISD-- 377
           SL+APS  KK G+    F  Y EL+Y F+  +L F+YSA QLFKGVCDIA+RG+LISD  
Sbjct: 75  SLAAPSP-KKNGQPPSSFTKYSELMYSFVVYVLVFVYSAFQLFKGVCDIAHRGILISDMV 133

Query: 376 --YISFILDQLTGYLLISSSSITVTAIQQIKPSTTLWKAAIVSVCMSFSTFLVIAACALL 203
             Y+SFILDQL GYLLIS  S+ + AIQQI  S +LWKA IVS+ MSF+TFLVI  C LL
Sbjct: 134 SDYLSFILDQLVGYLLISCCSVAILAIQQISRSASLWKATIVSIIMSFATFLVIVTCTLL 193

Query: 202 SVIRL 188
           S  +L
Sbjct: 194 SGYKL 198


>ref|XP_002299522.1| predicted protein [Populus trichocarpa] gi|222846780|gb|EEE84327.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  138 bits (347), Expect = 7e-31
 Identities = 72/122 (59%), Positives = 88/122 (72%), Gaps = 4/122 (3%)
 Frame = -2

Query: 541 APSTTKKKGEEHFIFHDYPELLYCFITTILAFIYSAHQLFKGVCDIAYRGVLISD----Y 374
           A S++KK       F DY ELLYCFI ++L F+YSA QLFKG+CDIA RG+LISD    Y
Sbjct: 61  AASSSKKDSPRPSSFADYSELLYCFIASVLVFVYSAFQLFKGICDIAQRGILISDMFSDY 120

Query: 373 ISFILDQLTGYLLISSSSITVTAIQQIKPSTTLWKAAIVSVCMSFSTFLVIAACALLSVI 194
           +SFILDQ+ GYLLISSSS+ + AIQQI  + ++ KA I+S  +SF TFLVI  C LLS  
Sbjct: 121 MSFILDQVAGYLLISSSSVAILAIQQIDKTASILKAVIISTVVSFVTFLVIVICTLLSGY 180

Query: 193 RL 188
           RL
Sbjct: 181 RL 182


>ref|XP_002276504.1| PREDICTED: CASP-like protein At4g11655 [Vitis vinifera]
           gi|297742581|emb|CBI34730.3| unnamed protein product
           [Vitis vinifera]
          Length = 218

 Score =  127 bits (319), Expect(2) = 3e-29
 Identities = 68/108 (62%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
 Frame = -2

Query: 499 FHDYPELLYCFITTILAFIYSAHQLFKGVCDIAYRGVLI----SDYISFILDQLTGYLLI 332
           F  YPEL YC + TILA  YSA QL KGVCDI ++G LI    SDY SFILDQL GYLL 
Sbjct: 106 FTKYPELTYCLVVTILALTYSAFQLCKGVCDITHKGFLISDRVSDYSSFILDQLVGYLLA 165

Query: 331 SSSSITVTAIQQIKPSTTLWKAAIVSVCMSFSTFLVIAACALLSVIRL 188
           SSSS+ + AIQ+++  T LWKA IVSVCMSF+ FLV A CAL S  +L
Sbjct: 166 SSSSVIIPAIQRLE-QTALWKAGIVSVCMSFAAFLVTAICALFSGYKL 212



 Score = 26.6 bits (57), Expect(2) = 3e-29
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3

Query: 195 SGYLLCKRVIW 163
           SGY LCKRVIW
Sbjct: 208 SGYKLCKRVIW 218


>emb|CAN82263.1| hypothetical protein VITISV_009281 [Vitis vinifera]
          Length = 477

 Score =  127 bits (318), Expect(2) = 3e-29
 Identities = 67/108 (62%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
 Frame = -2

Query: 499 FHDYPELLYCFITTILAFIYSAHQLFKGVCDIAYRGVLI----SDYISFILDQLTGYLLI 332
           F  YPEL YC + TILA  YSA QL KG+CDI ++G LI    SDY SFILDQL GYLL 
Sbjct: 365 FTKYPELTYCLVVTILALTYSAFQLCKGICDITHKGFLISDRVSDYSSFILDQLVGYLLA 424

Query: 331 SSSSITVTAIQQIKPSTTLWKAAIVSVCMSFSTFLVIAACALLSVIRL 188
           SSSS+ + AIQ+++  T LWKA IVSVCMSF+ FLV A CAL S  +L
Sbjct: 425 SSSSVIIPAIQRLE-QTALWKAGIVSVCMSFAAFLVTAICALFSGYKL 471



 Score = 26.6 bits (57), Expect(2) = 3e-29
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = -3

Query: 195 SGYLLCKRVIW 163
           SGY LCKRVIW
Sbjct: 467 SGYKLCKRVIW 477


>ref|NP_974535.1| uncharacterized protein [Arabidopsis thaliana]
           gi|122214588|sp|Q3EA54.1|CSPLL_ARATH RecName:
           Full=CASP-like protein At4g11655
           gi|332657635|gb|AEE83035.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 208

 Score =  108 bits (269), Expect = 7e-22
 Identities = 60/110 (54%), Positives = 73/110 (66%), Gaps = 6/110 (5%)
 Frame = -2

Query: 499 FHDYPELLYCFITTILAFIYSAHQLFKGVCDIAYRGVLI----SDYISFILDQLTGYLLI 332
           F  YPELLYCF   ++ F+Y++ Q FKGVCDI +RGVLI    SDYISFI DQ+  YLL+
Sbjct: 93  FASYPELLYCFGVAVIGFVYTSLQTFKGVCDITHRGVLISEPLSDYISFIFDQVICYLLV 152

Query: 331 SSSSITVTAIQQIKPST--TLWKAAIVSVCMSFSTFLVIAACALLSVIRL 188
           SSSS+ +  IQ I      TL   +IVSV MSFS FLV+    LLS  +L
Sbjct: 153 SSSSVAIAWIQHINEDAIKTLRNNSIVSVSMSFSAFLVLTLSGLLSGYKL 202


Top