BLASTX nr result

ID: Panax21_contig00034695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034695
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894659.1| clathrin adaptor complexes medium subunit fa...   291   4e-77
gb|ADC53238.1| clathrin-associated adaptor complexes medium subu...   290   9e-77
gb|AAG09104.1|AC009323_15 Putative clathrin-associated adaptor p...   290   1e-76
ref|NP_176052.3| clathrin adaptor complexes medium subunit-like ...   290   1e-76
ref|XP_002330025.1| predicted protein [Populus trichocarpa] gi|2...   290   1e-76

>ref|XP_002894659.1| clathrin adaptor complexes medium subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297340501|gb|EFH70918.1| clathrin adaptor complexes
           medium subunit family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 415

 Score =  291 bits (746), Expect = 4e-77
 Identities = 139/155 (89%), Positives = 151/155 (97%)
 Frame = -3

Query: 467 MLQCIFLLSDSGEVILEKQLTGHRVDRSICAWFWDQAISQGDSFKLVPVIASPTHYLFQV 288
           MLQCIFL+SDSGEV+LEKQLTGHRVDRSICAWFWDQ+ISQGDSFKL+PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQSISQGDSFKLLPVIASPTHYLFQI 60

Query: 287 VRDGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDLLKDNFVIVYELLDEMIDN 108
           VRDGIT LAC+QVEMPPLM IEFLCRVADVLS+YLGGLNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61  VRDGITLLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLVKDNFIIVYELLDEMIDN 120

Query: 107 GFPLTTEPNTLREMIAPPNIVSKVLSVVTGNTSNV 3
           GFPLTTEP+ LREMIAPPN+VSK+LSVVTGN SNV
Sbjct: 121 GFPLTTEPSILREMIAPPNLVSKMLSVVTGNASNV 155


>gb|ADC53238.1| clathrin-associated adaptor complexes medium subunit [Gossypium
           hirsutum]
          Length = 415

 Score =  290 bits (743), Expect = 9e-77
 Identities = 142/155 (91%), Positives = 148/155 (95%)
 Frame = -3

Query: 467 MLQCIFLLSDSGEVILEKQLTGHRVDRSICAWFWDQAISQGDSFKLVPVIASPTHYLFQV 288
           MLQCIFLLSDSGEV+LEKQLTGHRVDRSIC WFWD  ISQGDSFK  PVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWDHVISQGDSFKSQPVIASPTHYLFQV 60

Query: 287 VRDGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDLLKDNFVIVYELLDEMIDN 108
           VR+GITFLACTQVEMPPLMGIEFLCRV+DVLSDYLGGLNED++KDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMGIEFLCRVSDVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120

Query: 107 GFPLTTEPNTLREMIAPPNIVSKVLSVVTGNTSNV 3
           GFPLTTE N LREMIAPPNIVSKVLSVVTGN+SNV
Sbjct: 121 GFPLTTEANILREMIAPPNIVSKVLSVVTGNSSNV 155


>gb|AAG09104.1|AC009323_15 Putative clathrin-associated adaptor protein [Arabidopsis thaliana]
          Length = 417

 Score =  290 bits (742), Expect = 1e-76
 Identities = 138/155 (89%), Positives = 150/155 (96%)
 Frame = -3

Query: 467 MLQCIFLLSDSGEVILEKQLTGHRVDRSICAWFWDQAISQGDSFKLVPVIASPTHYLFQV 288
           MLQCIFL+SDSGEV+LEKQLTGHRVDRSICAWFWDQ ISQGDSFK +PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIASPTHYLFQI 60

Query: 287 VRDGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDLLKDNFVIVYELLDEMIDN 108
           VRDGITFLAC+QVEMPPLM IEFLCRVADVLS+YLGGLNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61  VRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 120

Query: 107 GFPLTTEPNTLREMIAPPNIVSKVLSVVTGNTSNV 3
           GFPLTTEP+ L+EMIAPPN+VSK+LSVVTGN SNV
Sbjct: 121 GFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNV 155


>ref|NP_176052.3| clathrin adaptor complexes medium subunit-like protein [Arabidopsis
           thaliana] gi|332195291|gb|AEE33412.1| clathrin adaptor
           complexes medium subunit-like protein [Arabidopsis
           thaliana]
          Length = 415

 Score =  290 bits (742), Expect = 1e-76
 Identities = 138/155 (89%), Positives = 150/155 (96%)
 Frame = -3

Query: 467 MLQCIFLLSDSGEVILEKQLTGHRVDRSICAWFWDQAISQGDSFKLVPVIASPTHYLFQV 288
           MLQCIFL+SDSGEV+LEKQLTGHRVDRSICAWFWDQ ISQGDSFK +PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIASPTHYLFQI 60

Query: 287 VRDGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDLLKDNFVIVYELLDEMIDN 108
           VRDGITFLAC+QVEMPPLM IEFLCRVADVLS+YLGGLNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61  VRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 120

Query: 107 GFPLTTEPNTLREMIAPPNIVSKVLSVVTGNTSNV 3
           GFPLTTEP+ L+EMIAPPN+VSK+LSVVTGN SNV
Sbjct: 121 GFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNV 155


>ref|XP_002330025.1| predicted protein [Populus trichocarpa] gi|222871450|gb|EEF08581.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  290 bits (742), Expect = 1e-76
 Identities = 140/155 (90%), Positives = 149/155 (96%)
 Frame = -3

Query: 467 MLQCIFLLSDSGEVILEKQLTGHRVDRSICAWFWDQAISQGDSFKLVPVIASPTHYLFQV 288
           MLQCIFLLSDSGEV+LEKQLTGHRVDRSICAWFWDQ +SQGDSFK  PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLLSDSGEVMLEKQLTGHRVDRSICAWFWDQIVSQGDSFKQQPVIASPTHYLFQI 60

Query: 287 VRDGITFLACTQVEMPPLMGIEFLCRVADVLSDYLGGLNEDLLKDNFVIVYELLDEMIDN 108
           VR+GITFLACTQVE PPLMGIEFLCRVADVLSDYL GLNED++KDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEKPPLMGIEFLCRVADVLSDYLEGLNEDVIKDNFVIVYELLDEMIDN 120

Query: 107 GFPLTTEPNTLREMIAPPNIVSKVLSVVTGNTSNV 3
           GFPLTTEPN LREMIAPPNIVSK+LSVVTGN+SN+
Sbjct: 121 GFPLTTEPNILREMIAPPNIVSKMLSVVTGNSSNM 155


Top