BLASTX nr result

ID: Panax21_contig00034690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034690
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain...    72   6e-11
ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding...    72   6e-11
ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding...    69   4e-10
ref|NP_973689.2| SNF2 and helicase domain-containing protein [Ar...    68   7e-10
ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arab...    67   1e-09

>ref|XP_004166129.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
           protein 1-like [Cucumis sativus]
          Length = 867

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 1   GYQDGSDRSEWYTVERLLRKYAAIYGVKIFVYYFR 105
           GYQDGSDRSEWYTVERLLRKYA+IY VKI+VYY+R
Sbjct: 830 GYQDGSDRSEWYTVERLLRKYASIYNVKIYVYYYR 864


>ref|XP_004140512.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
           [Cucumis sativus]
          Length = 868

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +1

Query: 1   GYQDGSDRSEWYTVERLLRKYAAIYGVKIFVYYFR 105
           GYQDGSDRSEWYTVERLLRKYA+IY VKI+VYY+R
Sbjct: 831 GYQDGSDRSEWYTVERLLRKYASIYNVKIYVYYYR 865


>ref|XP_003517934.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like [Glycine
            max]
          Length = 1482

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +1

Query: 1    GYQDGSDRSEWYTVERLLRKYAAIYGVKIFVYYFR 105
            GYQDGSDRSEWYT+ERLLRKYA+IY + I+VYY+R
Sbjct: 1445 GYQDGSDRSEWYTIERLLRKYASIYNINIYVYYYR 1479


>ref|NP_973689.2| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|330255399|gb|AEC10493.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 877

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 29/35 (82%), Positives = 34/35 (97%)
 Frame = +1

Query: 1   GYQDGSDRSEWYTVERLLRKYAAIYGVKIFVYYFR 105
           GYQDGSDRS+WYTVERLLRKY++I+ VKIFVYY+R
Sbjct: 840 GYQDGSDRSQWYTVERLLRKYSSIFTVKIFVYYYR 874


>ref|XP_002881993.1| hypothetical protein ARALYDRAFT_483627 [Arabidopsis lyrata subsp.
           lyrata] gi|297327832|gb|EFH58252.1| hypothetical protein
           ARALYDRAFT_483627 [Arabidopsis lyrata subsp. lyrata]
          Length = 873

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +1

Query: 1   GYQDGSDRSEWYTVERLLRKYAAIYGVKIFVYYFR 105
           GYQDGSDRS+WYTVERLL KY++I+ VKIFVYY+R
Sbjct: 836 GYQDGSDRSQWYTVERLLHKYSSIFAVKIFVYYYR 870


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