BLASTX nr result

ID: Panax21_contig00034639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034639
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containi...   236   1e-60
ref|XP_003624391.1| Pentatricopeptide repeat-containing protein ...   218   5e-55
ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
tpg|DAA35362.1| TPA: hypothetical protein ZEAMMB73_898339 [Zea m...   185   4e-45

>ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Cucumis sativus]
          Length = 769

 Score =  236 bits (602), Expect = 1e-60
 Identities = 114/154 (74%), Positives = 129/154 (83%)
 Frame = -3

Query: 505  EPNYITFICVLYACSLGGFIDEAQMYLSSMTDDYGILPGEDHYACMVNLLGLAGRTKEAE 326
            EPN+ITFICVL ACS GGFIDEA  Y SSM+ D+GI P EDHY CMVNLLG AG  KEAE
Sbjct: 616  EPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAE 675

Query: 325  ELILKMPCQPGVLVWQTLLGACQLHGDMSTATRAAEHALNLDKNDPSTYVLLSNMFAGTS 146
            +LIL+MP QPG LVWQTLLGAC +HGD+ T  RAAEHALNLD+NDPSTY+LLSNMFAG  
Sbjct: 676  DLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGD 735

Query: 145  NWDAVGMLRKLMESRDVKKRPGSSWIS*MEISQD 44
            NWD+VG+LR+LME+RDVKK PGSSW+S M  + D
Sbjct: 736  NWDSVGILRELMETRDVKKVPGSSWMSNMRRTID 769


>ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like
            [Cucumis sativus]
          Length = 769

 Score =  236 bits (602), Expect = 1e-60
 Identities = 114/154 (74%), Positives = 129/154 (83%)
 Frame = -3

Query: 505  EPNYITFICVLYACSLGGFIDEAQMYLSSMTDDYGILPGEDHYACMVNLLGLAGRTKEAE 326
            EPN+ITFICVL ACS GGFIDEA  Y SSM+ D+GI P EDHY CMVNLLG AG  KEAE
Sbjct: 616  EPNHITFICVLNACSQGGFIDEAWKYFSSMSADHGIAPSEDHYVCMVNLLGRAGCIKEAE 675

Query: 325  ELILKMPCQPGVLVWQTLLGACQLHGDMSTATRAAEHALNLDKNDPSTYVLLSNMFAGTS 146
            +LIL+MP QPG LVWQTLLGAC +HGD+ T  RAAEHALNLD+NDPSTY+LLSNMFAG  
Sbjct: 676  DLILQMPFQPGSLVWQTLLGACLVHGDIETGKRAAEHALNLDRNDPSTYILLSNMFAGGD 735

Query: 145  NWDAVGMLRKLMESRDVKKRPGSSWIS*MEISQD 44
            NWD+VG+LR+LME+RDVKK PGSSW+S M  + D
Sbjct: 736  NWDSVGILRELMETRDVKKVPGSSWMSNMRRTID 769


>ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499406|gb|AES80609.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 709

 Score =  218 bits (554), Expect = 5e-55
 Identities = 104/143 (72%), Positives = 117/143 (81%)
 Frame = -3

Query: 505 EPNYITFICVLYACSLGGFIDEAQMYLSSMTDDYGILPGEDHYACMVNLLGLAGRTKEAE 326
           EPNYITFICVLYACS GGF+DE   YLSSM  DYGI+PGEDHY CMV++LG AG  KEA+
Sbjct: 406 EPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAK 465

Query: 325 ELILKMPCQPGVLVWQTLLGACQLHGDMSTATRAAEHALNLDKNDPSTYVLLSNMFAGTS 146
           ELIL+MP  PGV VWQTLL ACQ+HGD+ T   AAEHA+  DKNDPS+YVLLSNM A TS
Sbjct: 466 ELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETS 525

Query: 145 NWDAVGMLRKLMESRDVKKRPGS 77
           NWD V  LR+LME+R+VKK PGS
Sbjct: 526 NWDCVVSLRELMETRNVKKVPGS 548


>ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
           [Vitis vinifera] gi|296087996|emb|CBI35279.3| unnamed
           protein product [Vitis vinifera]
          Length = 598

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/145 (68%), Positives = 114/145 (78%)
 Frame = -3

Query: 502 PNYITFICVLYACSLGGFIDEAQMYLSSMTDDYGILPGEDHYACMVNLLGLAGRTKEAEE 323
           PNYITFICVLYACS GG I+E   Y  SM  D+GI PGEDHYACMV++LG AG  KEA E
Sbjct: 449 PNYITFICVLYACSQGGLINEGWEYFLSMDRDHGISPGEDHYACMVDMLGRAGHIKEARE 508

Query: 322 LILKMPCQPGVLVWQTLLGACQLHGDMSTATRAAEHALNLDKNDPSTYVLLSNMFAGTSN 143
           LI +MP Q  VLVWQTLLGAC++HGD+ T   AA+ AL+LDK+D STYV+LSNMFA   N
Sbjct: 509 LIRRMPFQASVLVWQTLLGACRVHGDVETGLLAAKQALSLDKHDSSTYVVLSNMFADGRN 568

Query: 142 WDAVGMLRKLMESRDVKKRPGSSWI 68
           W  VG LR+LME+RDVKK PGSSWI
Sbjct: 569 WKGVGSLRELMETRDVKKMPGSSWI 593


>tpg|DAA35362.1| TPA: hypothetical protein ZEAMMB73_898339 [Zea mays]
          Length = 605

 Score =  185 bits (469), Expect = 4e-45
 Identities = 89/148 (60%), Positives = 109/148 (73%)
 Frame = -3

Query: 502 PNYITFICVLYACSLGGFIDEAQMYLSSMTDDYGILPGEDHYACMVNLLGLAGRTKEAEE 323
           PN +T +CVLYACS GGF+DE  +Y ++M D +GI PGEDHYACMV+LLG AG+ +EAEE
Sbjct: 450 PNRVTLVCVLYACSQGGFVDEGWIYFNAMKDKFGIQPGEDHYACMVDLLGKAGQIEEAEE 509

Query: 322 LILKMPCQPGVLVWQTLLGACQLHGDMSTATRAAEHALNLDKNDPSTYVLLSNMFAGTSN 143
           LI  MP +PGVLVWQ LLGAC LHG+ +   RAAEHAL L+ +DPSTY+LL N  AG  +
Sbjct: 510 LISGMPFRPGVLVWQALLGACHLHGNEAVGRRAAEHALALENDDPSTYMLLCNTLAGQHD 569

Query: 142 WDAVGMLRKLMESRDVKKRPGSSWIS*M 59
           WD    +R LM S+ + K PGSSW   M
Sbjct: 570 WDGARSVRVLMGSQTL-KLPGSSWFQSM 596


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