BLASTX nr result

ID: Panax21_contig00034634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034634
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12
ref|XP_002332133.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-12
ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-12
ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260...    75   1e-11
ref|XP_003544349.1| PREDICTED: probable polyamine oxidase 4-like...    74   2e-11

>ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|222868796|gb|EEF05927.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
 Frame = +3

Query: 78  VATRYLQXXXXXXXXXXNSTGRTQTNILDIVFSIEHLHSIKGFSGGSNLNQN-----FSN 242
           +AT YLQ          N++ RTQ+NI DI+ S+  + S++GF+GGS L+ +        
Sbjct: 69  IATLYLQTLAKTAVSYSNASNRTQSNIFDIINSLHDMSSVQGFTGGSTLHCSSGGIGLLR 128

Query: 243 SGPLLDIIKFVNYSDEIPFAKPLPRWCLEERDKFGIFGRGVEREKNGRNHISRWLPAIP 419
           SG   DI  FV +SDEIPFAKP+PR       +  I     E +  G  HI RWLP  P
Sbjct: 129 SGVFKDIKSFVEFSDEIPFAKPIPRGNSISLRRNSIPLEIDELDSRGL-HIPRWLPRFP 186


>ref|XP_002332133.1| predicted protein [Populus trichocarpa] gi|222875183|gb|EEF12314.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
 Frame = +3

Query: 78  VATRYLQXXXXXXXXXXNSTGRTQTNILDIVFSIEHLHSIKGFSGGSNLNQNFS-----N 242
           VAT  LQ          N++ RTQ+NI DI+ S+  ++S++GF+GGS L+ N S      
Sbjct: 35  VATLCLQTLAKTAVLYSNASNRTQSNIFDIINSLHDMYSVRGFTGGSTLHCNSSGMSLLR 94

Query: 243 SGPLLDIIKFVNYSDEIPFAKPLPRWCLEERDKFGIFGRGVEREKNGRN----HISRWLP 410
           S    +I  FV +SDEIPFAKP+PR      +   +    +  E N       HI RWLP
Sbjct: 95  SSVFKNIKSFVEFSDEIPFAKPIPR-----GESISLRRNSIPLELNKLGSRGLHIPRWLP 149

Query: 411 AIP 419
             P
Sbjct: 150 RCP 152


>ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|222832464|gb|EEE70941.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
 Frame = +3

Query: 78  VATRYLQXXXXXXXXXXNSTGRTQTNILDIVFSIEHLHSIKGFSGGSNLNQNFS-----N 242
           VAT  LQ          N++ RTQ+NI DI+ S+  ++S++GF+GGS L+ N S      
Sbjct: 59  VATLCLQTLAKTAVLYSNASNRTQSNIFDIINSLHDMYSVRGFTGGSTLHCNSSGMSLLR 118

Query: 243 SGPLLDIIKFVNYSDEIPFAKPLPRWCLEERDKFGIFGRGVEREKNGRN----HISRWLP 410
           S    +I  FV +SDEIPFAKP+PR      +   +    +  E N       HI RWLP
Sbjct: 119 SSVFKNIKSFVEFSDEIPFAKPIPR-----GESISLRRNSIPLELNKLGSRGLHIPRWLP 173

Query: 411 AIP 419
             P
Sbjct: 174 RCP 176


>ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260255 [Vitis vinifera]
          Length = 368

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 42/115 (36%), Positives = 64/115 (55%)
 Frame = +3

Query: 75  DVATRYLQXXXXXXXXXXNSTGRTQTNILDIVFSIEHLHSIKGFSGGSNLNQNFSNSGPL 254
           ++A RYL           N  GRTQ N+ D++  +E L S +GFSG S ++Q   +SG +
Sbjct: 56  NIAVRYLCDVGKTANFCANLAGRTQCNVFDVIRGLEDLGSSEGFSGASGVDQCIVSSGTV 115

Query: 255 LDIIKFVNYSDEIPFAKPLPRWCLEERDKFGIFGRGVEREKNGRNHISRWLPAIP 419
            +I+++VN + EIPFA+P+PR+ +    K       +     G+ HI  WLPA P
Sbjct: 116 REIVEYVNSAKEIPFAQPVPRFPVVRNCKATPSFVQMGETPVGK-HIPPWLPAFP 169


>ref|XP_003544349.1| PREDICTED: probable polyamine oxidase 4-like [Glycine max]
          Length = 741

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 42/116 (36%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = +3

Query: 75  DVATRYLQXXXXXXXXXXNSTGRTQTNILDIVFSIEHLHSIKGFSGGSNLNQ-NFSNSGP 251
           +V+TRY++          N++ RT +N+ D++  I  L S+ GF GGS +++ N   S  
Sbjct: 69  NVSTRYMEAIVRSASSFANASNRTDSNLFDLINGIHDLCSVLGFPGGSMIHKSNLLGSSA 128

Query: 252 LLDIIKFVNYSDEIPFAKPLPRWCLEERDKFGIFGRGVEREKNGRNHISRWLPAIP 419
           L +I+ FVN S++IPFAKP+P   + E       G  +   K  + HI RWLP  P
Sbjct: 129 LKEIMNFVNLSNKIPFAKPIPFRNVSEVTIDS--GTSMCLSKQAKTHIPRWLPDFP 182


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