BLASTX nr result

ID: Panax21_contig00034622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034622
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago ...   161   3e-37
ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus c...   160   6e-37
ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago ...   108   3e-21
ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulg...   105   3e-20
ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac...   102   2e-19

>ref|XP_003591561.1| hypothetical protein MTR_1g088810 [Medicago truncatula]
           gi|355480609|gb|AES61812.1| hypothetical protein
           MTR_1g088810 [Medicago truncatula]
          Length = 444

 Score =  161 bits (407), Expect = 3e-37
 Identities = 93/144 (64%), Positives = 99/144 (68%), Gaps = 1/144 (0%)
 Frame = +3

Query: 543 FSFAAY*ENRSRSSGPPLFIYTSCHARPRFQR-PSLDKKQNAPSPTALSSAGDFHEMKTG 719
           F  A++    SRSSGPPLFIYTSCH  P     P LDKKQNAPSPTALSSAGDFHEMKTG
Sbjct: 58  FPGASWDGRSSRSSGPPLFIYTSCHHDPIGTICPYLDKKQNAPSPTALSSAGDFHEMKTG 117

Query: 720 GIVVCSTFVALVYIPEYSYGRSVTQPT*TT*RFGPVPFGE*PLMARLSQLFSQFR*DSDR 899
           GIVVCST VALVYIPEYSYGRSVTQPT                  + S+       DSDR
Sbjct: 118 GIVVCSTLVALVYIPEYSYGRSVTQPT------------------KKSK-------DSDR 152

Query: 900 HFSESMVLAPLSPPPFELVHSVGD 971
           HFSESMVLA L PP  EL+HS+GD
Sbjct: 153 HFSESMVLAFLFPPSLELIHSLGD 176


>ref|YP_006291803.1| orf34 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081980|gb|AEY81172.1| orf34 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 148

 Score =  160 bits (405), Expect = 6e-37
 Identities = 78/93 (83%), Positives = 79/93 (84%)
 Frame = +1

Query: 205 EAWLTNRFEEATGVLSSNDAYGLSHSHPKWWPDSAWPGRXXXXXXXXXXRESLSMLACGG 384
           +AWLTN FEEATGVLSSNDA GLSHSHPK WPDSAWPGR          RESLSMLACGG
Sbjct: 56  KAWLTNHFEEATGVLSSNDACGLSHSHPKRWPDSAWPGREESHIETTTLRESLSMLACGG 115

Query: 385 GLSYGSPAAASDRPSRLILIWLYLYVASHVSST 483
           GLSYGSPAA SDRPSRLILIWLYLYVASHVSST
Sbjct: 116 GLSYGSPAATSDRPSRLILIWLYLYVASHVSST 148


>ref|XP_003588286.1| hypothetical protein MTR_1g005270 [Medicago truncatula]
           gi|355477334|gb|AES58537.1| hypothetical protein
           MTR_1g005270 [Medicago truncatula]
          Length = 126

 Score =  108 bits (269), Expect = 3e-21
 Identities = 52/54 (96%), Positives = 52/54 (96%)
 Frame = +3

Query: 639 PSLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTFVALVYIPEYSYGRSVTQPT 800
           P LDKKQNAPSPTALSSAGDFHEMKTGGIVVCST VALVYIPEYSYGRSVTQPT
Sbjct: 54  PYLDKKQNAPSPTALSSAGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVTQPT 107



 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 53/112 (47%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = +1

Query: 514 THQSARPLSYSALPPIKRIGPVQAVRLYSSIPAATHDP-DFSAPL*IRSRTRHHLQPFPL 690
           THQSARPLSYSALPPIKRIGPVQA RLYSSIPAATHDP     P   + +          
Sbjct: 11  THQSARPLSYSALPPIKRIGPVQAARLYSSIPAATHDPIGTICPYLDKKQNAPSPTALSS 70

Query: 691 PGTSTK*KRAASSYAPLLLPWFISRSTPMADLSPNLLKQPKGLAPSRLENDP 846
            G   + K         L+                  K+ KGL PSRLENDP
Sbjct: 71  AGDFHEMKTGGIVVCSTLVALVYIPEYSYGRSVTQPTKKSKGLTPSRLENDP 122


>ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulgaris subsp. maritima]
           gi|346683233|ref|YP_004842165.1| hypothetical protein
           BemaM_p121 [Beta macrocarpa]
           gi|317905592|emb|CBX33215.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439875|emb|CBX33310.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148029|emb|CBJ20693.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500151|emb|CBX24970.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977923|emb|CBL54147.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 133

 Score =  105 bits (261), Expect = 3e-20
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = -1

Query: 144 MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQ 1
           MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQ
Sbjct: 1   MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQ 48


>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
           gi|56806565|dbj|BAD83466.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 142

 Score =  102 bits (253), Expect = 2e-19
 Identities = 47/48 (97%), Positives = 47/48 (97%)
 Frame = -1

Query: 144 MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQ 1
           MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVG RNSSEIVMAQ
Sbjct: 1   MLSHRQRLGKHGRATCRETCTCGSGRGPRYTVLICVGSRNSSEIVMAQ 48


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