BLASTX nr result

ID: Panax21_contig00034596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034596
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    56   3e-06
ref|XP_002336911.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
 Frame = -1

Query: 238  NPIEALPESIETLPNLEYLSVSSCNRLRSRIGLPCSVRYLFAGEIKSLERITFKSKPQLL 59
            NPI ++PESI +L  L+YL +  C RL+S   LP S+  L A    SLERIT  + P LL
Sbjct: 764  NPIYSIPESINSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERIT--NLPNLL 821

Query: 58   RYVGFN----SRLREVQGFFRLE 2
              +        +L EVQG F+LE
Sbjct: 822  STLQVELFGCGQLVEVQGLFKLE 844


>ref|XP_002336911.1| predicted protein [Populus trichocarpa] gi|222837116|gb|EEE75495.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = -1

Query: 238 NPIEALPESIETLPNLEYLSVSSCNRLRSRIGLPCSVRYLFAGEIKSLERITFKSKPQLL 59
           N   +LP  +  LP L +LSV +C  L S   LP S+ +LFA   KSL+R+   S+P+  
Sbjct: 138 NKFSSLPSGLGFLPKLRWLSVQACKYLVSIPDLPSSLDFLFAAHCKSLKRVRIPSEPKKE 197

Query: 58  RYVGFNS--RLREVQG 17
            Y+G  +   L E+QG
Sbjct: 198 LYIGLENSHSLEEIQG 213


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