BLASTX nr result

ID: Panax21_contig00034549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034549
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73469.1| hypothetical protein VITISV_000273 [Vitis vinifera]   134   9e-30
ref|XP_002315937.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002526983.1| hypothetical protein RCOM_1308310 [Ricinus c...   104   1e-20
ref|XP_002532157.1| hypothetical protein RCOM_1158870 [Ricinus c...    88   1e-15
ref|XP_004138347.1| PREDICTED: uncharacterized protein LOC101204...    86   5e-15

>emb|CAN73469.1| hypothetical protein VITISV_000273 [Vitis vinifera]
          Length = 227

 Score =  134 bits (338), Expect = 9e-30
 Identities = 87/181 (48%), Positives = 103/181 (56%), Gaps = 7/181 (3%)
 Frame = -1

Query: 594 KTQSTNFGLLPTALKQKQRNPVAIAYHDKRPNPPVIIYTHSPKIIHAQAPEFMALVQKLT 415
           K  ST     P A K +QR+PV             IIYTHSPKIIH QA +FMALVQKLT
Sbjct: 66  KPSSTLSFSKPPAAKHQQRHPV-------------IIYTHSPKIIHTQARDFMALVQKLT 112

Query: 414 GPTHDPQQNKYSCPDDLQDHDTGKNSSPDEK-------NDNCGGTGTDVGQPSSAVSSLF 256
           G +      + + P   Q  +  K SS D+        +D+CGG G D    SS+VS +F
Sbjct: 113 GLSSSSDSVQNNAP--AQPQEAVKASSRDDNESSSVLTDDHCGGAG-DAQVSSSSVSPIF 169

Query: 255 GSRYSYLADIPLFTPNSTDFLCSPRPLFRYSDMVSPSPNMANISMPSPSFLDLIKGGLPE 76
            +   YLADIPLFTPNSTDF CSP P +RY D    SPNMAN    SPS  + +K GLPE
Sbjct: 170 NASNPYLADIPLFTPNSTDFFCSPCPFYRYPDPAFSSPNMAN--SISPSVFEFMK-GLPE 226

Query: 75  Y 73
           Y
Sbjct: 227 Y 227


>ref|XP_002315937.1| predicted protein [Populus trichocarpa] gi|222864977|gb|EEF02108.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  106 bits (265), Expect = 3e-21
 Identities = 71/166 (42%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
 Frame = -1

Query: 501 NPPVIIYTHSPKIIHAQAPEFMALVQKLTGPTHDPQQNKYSCPDDLQDHD---------- 352
           N PVIIYTHSPK+IH QA +FMALVQ LTG +    Q         QDH           
Sbjct: 67  NQPVIIYTHSPKVIHTQAKDFMALVQNLTGLSRSNNQEMAPPAQQGQDHQGVVSKGLKAG 126

Query: 351 ------------TGKNSSPDEKNDNCGGTGTDVGQPSSAVSS-LFGSRYSYLADIPLFTP 211
                          +SS     +NC G     G     VS  L      Y AD+PLFTP
Sbjct: 127 RGNGNGRKHVGHGDNDSSSISTEENCHGAAAAAGGVDIVVSPFLKPPNAPYFADVPLFTP 186

Query: 210 NSTDFLCSPRPLFRYSDMVSPSPNMANISMPSPSFLDLIKGGLPEY 73
            S+DF  SPRP+FR  D V  SP M N    SPS L+ IK GLPEY
Sbjct: 187 TSSDFFFSPRPVFRCPDSVFASPKMGN--PISPSVLEFIK-GLPEY 229


>ref|XP_002526983.1| hypothetical protein RCOM_1308310 [Ricinus communis]
           gi|223533618|gb|EEF35355.1| hypothetical protein
           RCOM_1308310 [Ricinus communis]
          Length = 212

 Score =  104 bits (259), Expect = 1e-20
 Identities = 69/156 (44%), Positives = 88/156 (56%), Gaps = 15/156 (9%)
 Frame = -1

Query: 495 PVIIYTHSPKIIHAQAPEFMALVQKLTG--------PTHDPQQNKYSCPDDLQDHDTGKN 340
           PVIIYTHSPK+IH QA +FMALVQKLTG        P+  P Q         +  D+ + 
Sbjct: 66  PVIIYTHSPKVIHTQARDFMALVQKLTGLSSSRNDEPSLLPAQQIQGSGVTNKGSDSKRG 125

Query: 339 SSPDEKN------DNCGGTGTDVGQPSSAVSSLFGSRYSYLADIPLFTPNSTDFLCSPRP 178
            S + +N      +NCGG G  +  P      L   +  Y ADIPLFTP S D+ CSP+P
Sbjct: 126 RSNENENSLISTDENCGGGG--INSPI-----LNPPKNPYFADIPLFTPTSVDYFCSPKP 178

Query: 177 LFRYSDMV-SPSPNMANISMPSPSFLDLIKGGLPEY 73
           ++RYS+   S SP + N   PS + L+ IK GLPEY
Sbjct: 179 VYRYSESAYSSSPVIGNSVSPSAA-LEFIK-GLPEY 212


>ref|XP_002532157.1| hypothetical protein RCOM_1158870 [Ricinus communis]
           gi|223528167|gb|EEF30231.1| hypothetical protein
           RCOM_1158870 [Ricinus communis]
          Length = 237

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 25/169 (14%)
 Frame = -1

Query: 531 VAIAYHDKRPNP--PVIIYTHSPKIIHAQAPEFMALVQKLTGPTHD---------PQQNK 385
           +A+A   K P    PVIIYTHSPKIIH    +FMALVQKLTG +H           ++ K
Sbjct: 61  LAVAGPAKPPQQRHPVIIYTHSPKIIHTHPRDFMALVQKLTGLSHSSLDQAPRAKQEEGK 120

Query: 384 YSCPDD-------LQDHDTGKNSSPDEKNDNCGGTGT-DVGQPSSA-VSSLFGSRYSYLA 232
            S  D+       +  +D  ++SS   + +NCG   +   GQ +S  V  +F     Y+ 
Sbjct: 121 LSSEDENNKSRMKIVGNDDNESSSVITEENNCGNNSSIGDGQVNSCFVPPIFEPPNPYIT 180

Query: 231 DIPLFTPNSTDFLCSPRPLF-RYSDMV---SPSPNMANISM-PSPSFLD 100
           +IP+FTPNS DFLC+ +P +  Y+D +   +P+  M   S+  SPS L+
Sbjct: 181 NIPVFTPNSADFLCANQPFYNNYTDSLFFSTPNNMMMRTSISSSPSTLE 229


>ref|XP_004138347.1| PREDICTED: uncharacterized protein LOC101204352 [Cucumis sativus]
           gi|449477450|ref|XP_004155026.1| PREDICTED:
           uncharacterized LOC101204352 [Cucumis sativus]
          Length = 246

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 57/151 (37%), Positives = 77/151 (50%), Gaps = 39/151 (25%)
 Frame = -1

Query: 495 PVIIYTHSPKIIHAQAPEFMALVQKLTGPT-----HDPQQNKYSCPDDLQDHDTGKNSSP 331
           PVIIYTHSPKIIH    +FMALVQKLTG +     H+    K +      D +   N++ 
Sbjct: 81  PVIIYTHSPKIIHTHPRDFMALVQKLTGMSRSDHDHEASTTKLATTKSAVDENNNNNNNN 140

Query: 330 DE-------KNDN------------CGGTGT---DVGQPSSAVSSLFGSRY--------- 244
           ++        +DN            CGG G+   +VGQ    V+S FG            
Sbjct: 141 NKGSKAAVVNDDNESSSVVTTDENCCGGGGSGLMEVGQ----VNSCFGPAIFEPPPPPPQ 196

Query: 243 ---SYLADIPLFTPNSTDFLCSPRPLFRYSD 160
              SYL +IP++TPNST+FLC+ +P+F Y D
Sbjct: 197 LANSYLTNIPIYTPNSTEFLCTNQPIFNYDD 227


Top