BLASTX nr result

ID: Panax21_contig00034545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034545
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509962.1| protein binding protein, putative [Ricinus c...   171   7e-41
ref|XP_002270160.1| PREDICTED: putative E3 ubiquitin-protein lig...   169   2e-40
ref|XP_002299475.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-38
gb|AFK33871.1| unknown [Medicago truncatula]                          153   2e-35
ref|XP_002303646.1| predicted protein [Populus trichocarpa] gi|1...   153   2e-35

>ref|XP_002509962.1| protein binding protein, putative [Ricinus communis]
           gi|223549861|gb|EEF51349.1| protein binding protein,
           putative [Ricinus communis]
          Length = 420

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 3/128 (2%)
 Frame = -3

Query: 407 YCICGGLYPDPDLEEQVEMIQCCICEDWFHEEHLGLESSDEVPRDEEGEPLYEDFICQVC 228
           YC CG  YPDPD+EEQ EMIQC +CEDWFHEEHLGLESSDE+PRDEEGEPLYEDFIC+ C
Sbjct: 127 YCSCGRPYPDPDVEEQEEMIQCIMCEDWFHEEHLGLESSDEIPRDEEGEPLYEDFICKTC 186

Query: 227 SGVCSFLTLYPQTIWAATKQS---AANTTEERYVVENASLACGSNVELEIGSCSVDSTKA 57
           S  CSFLTLYPQTIWAA  QS    ANT++++ V+E+   ACGS  +LE  +CS  S   
Sbjct: 187 SATCSFLTLYPQTIWAAGGQSGDVTANTSKDKNVLEDIPSACGSG-KLENDACSHGS--- 242

Query: 56  GGETSANS 33
           G +  AN+
Sbjct: 243 GEDIMANA 250


>ref|XP_002270160.1| PREDICTED: putative E3 ubiquitin-protein ligase UBR7 [Vitis
           vinifera] gi|297742333|emb|CBI34482.3| unnamed protein
           product [Vitis vinifera]
          Length = 416

 Score =  169 bits (428), Expect = 2e-40
 Identities = 76/108 (70%), Positives = 87/108 (80%), Gaps = 2/108 (1%)
 Frame = -3

Query: 407 YCICGGLYPDPDLEEQVEMIQCCICEDWFHEEHLGLESSDEVPRDEEGEPLYEDFICQVC 228
           YC CG  YPDPD+EEQ EMIQCCICEDWFHEEHLGLESSDE+PRDEEGEPLYEDFICQ C
Sbjct: 127 YCTCGRPYPDPDIEEQEEMIQCCICEDWFHEEHLGLESSDEIPRDEEGEPLYEDFICQTC 186

Query: 227 SGVCSFLTLYPQTIWAATKQ--SAANTTEERYVVENASLACGSNVELE 90
           SGV SFLTLYP++IWA  +Q  +  N  +E+ V E+    CGS+ +LE
Sbjct: 187 SGVFSFLTLYPKSIWAGVRQHDATVNNNKEKDVFEDPPSVCGSSQKLE 234


>ref|XP_002299475.1| predicted protein [Populus trichocarpa] gi|222846733|gb|EEE84280.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/128 (62%), Positives = 94/128 (73%), Gaps = 3/128 (2%)
 Frame = -3

Query: 407 YCICGGLYPDPDLEEQVEMIQCCICEDWFHEEHLGLESSDEVPRDEEGEPLYEDFICQVC 228
           YC C   YPDPD + Q EMIQC +CEDWFHEEHLGLES +E+PRDEEGEPLYEDFIC+ C
Sbjct: 127 YCSCDRPYPDPDAKAQEEMIQCIMCEDWFHEEHLGLESFNEIPRDEEGEPLYEDFICKTC 186

Query: 227 SGVCSFLTLYPQTIWAATKQ---SAANTTEERYVVENASLACGSNVELEIGSCSVDSTKA 57
           S VCSFLTLYPQTIW A  Q   + A+  + + V+EN S ACGS  +LEI  C+ DS++ 
Sbjct: 187 STVCSFLTLYPQTIWEAGGQKGDATASNAKNKGVLENVSSACGSG-KLEIDICAHDSSEK 245

Query: 56  GGETSANS 33
              T ANS
Sbjct: 246 DNAT-ANS 252


>gb|AFK33871.1| unknown [Medicago truncatula]
          Length = 417

 Score =  153 bits (386), Expect = 2e-35
 Identities = 70/118 (59%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
 Frame = -3

Query: 407 YCICGGLYPDPDLEEQVEMIQCCICEDWFHEEHLGLESSDEVPRDEEGEPLYEDFICQVC 228
           YC C   YPDPD EEQ+EMIQCC+CEDWFHEEHLGLESSDE+PRDEEGEPLYEDF+C+ C
Sbjct: 128 YCTCARPYPDPDAEEQIEMIQCCLCEDWFHEEHLGLESSDEIPRDEEGEPLYEDFMCKAC 187

Query: 227 SGVCSFLTLYPQTIWAATKQ--SAANTTEERYVVENASLACGSNVELEIGSCSVDSTK 60
           S VC FL LYP+ I  A KQ  + A  ++++ ++E+    CG   E  +G  S +S K
Sbjct: 188 SEVCFFLKLYPEVILVAGKQPNATAQVSKDKGILEDTPSTCG--FEKPLGDTSYNSPK 243


>ref|XP_002303646.1| predicted protein [Populus trichocarpa] gi|118483763|gb|ABK93774.1|
           unknown [Populus trichocarpa]
           gi|222841078|gb|EEE78625.1| predicted protein [Populus
           trichocarpa]
          Length = 415

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 2/133 (1%)
 Frame = -3

Query: 407 YCICGGLYPDPDLEEQVEMIQCCICEDWFHEEHLGLESSDEVPRDEEGEPLYEDFICQVC 228
           YC C   YPDPD+E Q EMIQC +CEDWFH+EHLGLESS+E+PRDEEGEPLYEDFIC+ C
Sbjct: 127 YCSCDRPYPDPDVEAQEEMIQCIMCEDWFHDEHLGLESSNEIPRDEEGEPLYEDFICKTC 186

Query: 227 SGVCSFLTLYPQTIWAATKQSAA--NTTEERYVVENASLACGSNVELEIGSCSVDSTKAG 54
           S VCSFLTLYP+TI AA  +  A  +  +++ V+E+   ACGS  +LE   C+ +S++  
Sbjct: 187 STVCSFLTLYPKTIRAAGGKGDATYSNAKDKDVLEDVPTACGSG-KLENDICANNSSEKD 245

Query: 53  GETSANSGVVIES 15
             T+  +  V ES
Sbjct: 246 NATAGKASAVGES 258


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