BLASTX nr result

ID: Panax21_contig00034541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034541
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   171   2e-40
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...   133   3e-29
ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cu...   133   3e-29
ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Gl...   124   1e-26
sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; A...   102   5e-20

>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  171 bits (432), Expect = 2e-40
 Identities = 100/244 (40%), Positives = 139/244 (56%), Gaps = 21/244 (8%)
 Frame = -3

Query: 672  WIKMILEKKTDSDIMDYRNQNSPLKCERRSYNQPIKRFLQSEDTDVVLLGNLK------- 514
            W+K  LE   D + M   N+ S L C  RS+  PI R L SE   V+LLG+LK       
Sbjct: 604  WMKNQLEG--DCETMVNNNEFSQLSCGGRSHGLPITRILPSEAIGVILLGSLKVSKMNIL 661

Query: 513  ------------SFQSSGSLQLVDATGSIDIVIPDLPSTWSIDSIYKIYDFTVVMESISD 370
                            SG LQL+DATG ID+VIPDLPS  + +SIY++ D+++VME + D
Sbjct: 662  FTHIIITTATELQISPSGRLQLIDATGCIDVVIPDLPSDCNSNSIYEVNDYSLVMEGMPD 721

Query: 369  QADDMESLSSESFSCRNLFNNVPFVRERKLAIFLYCQFSDENSRNRSFCPGLHWKG--FE 196
              D    +  E FSCR++F + P VRE  L +++Y      + +     P ++ K    E
Sbjct: 722  HLDHFGLVEMEPFSCRSIFESSPLVREISLTMYVYFHLRKSSLQKFLVHPHMNLKDNLKE 781

Query: 195  ELSGRFHMLRITHKYPVLQKLQGDQVISNRSSIFAEAIILPWDLFLSEKDGDEYATTSED 16
               GRFHML +THK+PVLQK Q DQ +S+  S+F EA++LPWDLFLS K+  +    S+D
Sbjct: 782  PEDGRFHMLHVTHKFPVLQKFQKDQAVSDGLSMFVEAVVLPWDLFLSGKNPTK---VSKD 838

Query: 15   HQKD 4
             +K+
Sbjct: 839  QKKE 842


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score =  133 bits (335), Expect = 3e-29
 Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
 Frame = -3

Query: 591  RRSYNQPIKRFLQSEDTDVVLLGNLKSFQSSGSLQLVDATGSIDIVIPDLPSTWSIDSIY 412
            + S++ P ++  +SED   VL+G+LK    SG LQLVDATG ID+++PDLPSTW+++ IY
Sbjct: 564  KSSHDTP-RKIYRSEDIGFVLVGSLKISTYSGRLQLVDATGGIDVMVPDLPSTWNVNGIY 622

Query: 411  KIYDFTVVMESISDQADDMESLSSESFSCRNLFNNVPFVRERKLAIFLYCQFSDENSRNR 232
            ++  + VV+E I       + L ++SFSCR  F +V   R+    I++Y Q+ + + +  
Sbjct: 623  EVSKYIVVIEGIPQME---KYLINQSFSCRRFFQSVSSERDLSTTIYVYFQYRNASCKK- 678

Query: 231  SFCPGLHWKG-------FEELSGRFHMLRITHKYPVLQKLQGDQVISNRSSIFAEAIILP 73
               P             FE  SG + +L +THK+P+ QK QG  +  N SS+F EA++ P
Sbjct: 679  --LPSYSCNDNASDLVIFE--SGTYDLLEVTHKFPMSQKFQGKHLAPNTSSMFVEAVLHP 734

Query: 72   WDLFLSEKDGDEYAT 28
            W+LFL+E +  +Y+T
Sbjct: 735  WNLFLTESE-KKYST 748


>ref|XP_004141370.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1383

 Score =  133 bits (335), Expect = 3e-29
 Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 7/195 (3%)
 Frame = -3

Query: 591  RRSYNQPIKRFLQSEDTDVVLLGNLKSFQSSGSLQLVDATGSIDIVIPDLPSTWSIDSIY 412
            + S++ P ++  +SED   VL+G+LK    SG LQLVDATG ID+++PDLPSTW+++ IY
Sbjct: 564  KSSHDTP-RKIYRSEDIGFVLVGSLKISTYSGRLQLVDATGGIDVMVPDLPSTWNVNGIY 622

Query: 411  KIYDFTVVMESISDQADDMESLSSESFSCRNLFNNVPFVRERKLAIFLYCQFSDENSRNR 232
            ++  + VV+E I       + L ++SFSCR  F +V   R+    I++Y Q+ + + +  
Sbjct: 623  EVSKYIVVIEGIPQME---KYLINQSFSCRRFFQSVSSERDLSTTIYVYFQYRNASCKK- 678

Query: 231  SFCPGLHWKG-------FEELSGRFHMLRITHKYPVLQKLQGDQVISNRSSIFAEAIILP 73
               P             FE  SG + +L +THK+P+ QK QG  +  N SS+F EA++ P
Sbjct: 679  --LPSYSCNDNASDLVIFE--SGTYDLLEVTHKFPMSQKFQGKHLAPNTSSMFVEAVLHP 734

Query: 72   WDLFLSEKDGDEYAT 28
            W+LFL+E +  +Y+T
Sbjct: 735  WNLFLTESE-KKYST 748


>ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Glycine max]
          Length = 706

 Score =  124 bits (312), Expect = 1e-26
 Identities = 67/154 (43%), Positives = 97/154 (62%), Gaps = 2/154 (1%)
 Frame = -3

Query: 504 SSGSLQLVDATGSIDIVIPDLPSTWSIDSIYKIYDFTVVMESISDQADDMESLSSESFSC 325
           S+  LQLVDATG IDI+IPDLP TW+ + IY++ DF VV++SI +  D +E L SES SC
Sbjct: 168 STRRLQLVDATGGIDILIPDLPLTWNPNEIYEVTDFDVVVDSIGELVDQIELLGSESLSC 227

Query: 324 RNLFNNVPFVRERKLAIFLYCQFSDENSRNRSFCPGLHWKGFEEL--SGRFHMLRITHKY 151
           R +FN      E   +IF+YC + +   +N      ++ K   E    G +H+LR++HK+
Sbjct: 228 RTIFNCTKAEGELSTSIFVYCHWKNAKCKNIPLYSCINSKNETETLEPGSYHLLRVSHKF 287

Query: 150 PVLQKLQGDQVISNRSSIFAEAIILPWDLFLSEK 49
           P LQ+   ++ +S +SS F EAI+ P+ L LS K
Sbjct: 288 P-LQEKYSNKAVSCKSSTFVEAILFPFILLLSGK 320


>sp|D0EL35.2|CTC1_ARATH RecName: Full=CST complex subunit CTC1; AltName: Full=Protein
            CONSERVED TELOMERE MAINTENANCE COMPONENT 1; Short=AtCTC1
          Length = 1272

 Score =  102 bits (255), Expect = 5e-20
 Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 2/194 (1%)
 Frame = -3

Query: 588  RSYNQPIKRFLQSEDTDVVLLGNLKSFQSSGSLQLVDATGSIDIVIPDLPSTWSIDSIYK 409
            + YN    + L+SEDT V+LLG LK   SSG LQL D T SID++ PDL S  +   I +
Sbjct: 521  KRYNNTNPKTLRSEDTGVILLGRLK-ISSSGRLQLHDRTSSIDVLTPDLLSDRNASRICE 579

Query: 408  IYDFTVVMESISDQADDMESLSSESFSCRNLFNNVPFVRERKLAIFLYCQFSDENSRNRS 229
            + D+ +++E I +    M  L +  F C ++ N  P   +  L +         + ++  
Sbjct: 580  VPDYYLIIEGIPESMLHMPFLKN-PFRCSSVLNPTPLAIKNTLTVPFSLSLGTASCKHLL 638

Query: 228  FCPGLHWK-GFEEL-SGRFHMLRITHKYPVLQKLQGDQVISNRSSIFAEAIILPWDLFLS 55
                  W+  F E   G FH+ R+THK+P+L+   G   + + +S+F EA++LPWDL  +
Sbjct: 639  KHHPFDWRHDFNEFKEGFFHLFRVTHKFPILK--NGHPGMPDCTSVFIEALVLPWDLICT 696

Query: 54   EKDGDEYATTSEDH 13
              + +  A   E+H
Sbjct: 697  VTEEEAAAPNFEEH 710


Top