BLASTX nr result
ID: Panax21_contig00034528
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034528 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vi... 173 2e-41 ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|2... 166 3e-39 ref|XP_002524745.1| conserved hypothetical protein [Ricinus comm... 145 7e-33 ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatul... 139 5e-31 gb|AFK40847.1| unknown [Medicago truncatula] 134 2e-29 >ref|XP_003632321.1| PREDICTED: CST complex subunit STN1-like [Vitis vinifera] gi|147810449|emb|CAN65336.1| hypothetical protein VITISV_023849 [Vitis vinifera] Length = 165 Score = 173 bits (438), Expect = 2e-41 Identities = 84/119 (70%), Positives = 102/119 (85%), Gaps = 4/119 (3%) Frame = -3 Query: 347 THVKLLAFDFLSLTSIPS----DPTTFSRRGTHTPISRAETVGIITTRDLKPNKFLRFTI 180 THVKLLAFD LSLT PS DP +FSRRGT P+SRAET+G +T+R+LKP+KFL+FT+ Sbjct: 8 THVKLLAFDLLSLTQTPSPSSSDPISFSRRGT--PLSRAETLGTVTSRELKPHKFLKFTV 65 Query: 179 DDGTGCIPCILWLNHLTSPYFSRRNPSDVRLIAEVAAGFASLIQLGVVARVRGRITGYR 3 DDGTGC+PC+LWLNHL+SPYFSRRNP+DVRLIA++A AS ++LGV+ RVRGRIT YR Sbjct: 66 DDGTGCVPCVLWLNHLSSPYFSRRNPADVRLIADLAEYQASEVKLGVLVRVRGRITAYR 124 >ref|XP_002307601.1| predicted protein [Populus trichocarpa] gi|222857050|gb|EEE94597.1| predicted protein [Populus trichocarpa] Length = 166 Score = 166 bits (420), Expect = 3e-39 Identities = 82/119 (68%), Positives = 100/119 (84%), Gaps = 4/119 (3%) Frame = -3 Query: 347 THVKLLAFDFLSLTSIPS----DPTTFSRRGTHTPISRAETVGIITTRDLKPNKFLRFTI 180 THVKLLAFD LSL PS DP TF+R+ +T ISR E +G+IT+R+LKPNKFL+FTI Sbjct: 8 THVKLLAFDLLSLAQTPSFSTYDPITFTRK--NTTISRTEILGVITSRELKPNKFLKFTI 65 Query: 179 DDGTGCIPCILWLNHLTSPYFSRRNPSDVRLIAEVAAGFASLIQLGVVARVRGRITGYR 3 DDGTGC+ C+LWLN LTSPYFSRRNP++V+LIA++AA FAS I++G+VARVRGRI GYR Sbjct: 66 DDGTGCVTCVLWLNQLTSPYFSRRNPANVKLIADMAAHFASEIKIGLVARVRGRIAGYR 124 >ref|XP_002524745.1| conserved hypothetical protein [Ricinus communis] gi|223535929|gb|EEF37588.1| conserved hypothetical protein [Ricinus communis] Length = 166 Score = 145 bits (365), Expect = 7e-33 Identities = 76/118 (64%), Positives = 89/118 (75%), Gaps = 4/118 (3%) Frame = -3 Query: 344 HVKLLAFDFLSLTSIP----SDPTTFSRRGTHTPISRAETVGIITTRDLKPNKFLRFTID 177 HVKLLA D +SLT P SDP +FS + SRAE +GI+T+ + KP+KFL+FTID Sbjct: 9 HVKLLALDLVSLTQTPPFSPSDPISFSH--ANKSFSRAEILGIVTSCEHKPHKFLKFTID 66 Query: 176 DGTGCIPCILWLNHLTSPYFSRRNPSDVRLIAEVAAGFASLIQLGVVARVRGRITGYR 3 DGTGC+ CILWLN LTSPYFSRR+ VRLIA A FASLI++GVVARVRGRIT YR Sbjct: 67 DGTGCVSCILWLNQLTSPYFSRRSTPAVRLIASTATHFASLIKIGVVARVRGRITSYR 124 >ref|XP_003612019.1| CST complex subunit STN1 [Medicago truncatula] gi|355513354|gb|AES94977.1| CST complex subunit STN1 [Medicago truncatula] Length = 185 Score = 139 bits (349), Expect = 5e-31 Identities = 72/116 (62%), Positives = 89/116 (76%), Gaps = 1/116 (0%) Frame = -3 Query: 347 THVKLLAFDFLSLTSIPSDPTTFSRRGTHTPISRAETVGIITTRDLKPNKFLRFTIDDGT 168 THVKLLAFD L+LT S +F+R PI+RAETVG IT RD KP KFLRF IDDGT Sbjct: 15 THVKLLAFDLLTLTPPISPNHSFTRNSI--PITRAETVGTITLRDHKPFKFLRFAIDDGT 72 Query: 167 GCIPCILWLNHLTSPYFS-RRNPSDVRLIAEVAAGFASLIQLGVVARVRGRITGYR 3 GCIPCILWLNH+TSP+ + RR+P D+ L+A+ AA A ++++G VARVRGR+T Y+ Sbjct: 73 GCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVVKVGNVARVRGRVTEYK 128 >gb|AFK40847.1| unknown [Medicago truncatula] Length = 179 Score = 134 bits (336), Expect = 2e-29 Identities = 71/116 (61%), Positives = 86/116 (74%), Gaps = 1/116 (0%) Frame = -3 Query: 347 THVKLLAFDFLSLTSIPSDPTTFSRRGTHTPISRAETVGIITTRDLKPNKFLRFTIDDGT 168 THVKLLAFD L+LT S +F+R I+RAETVG IT RD KP KFLRF IDDGT Sbjct: 15 THVKLLAFDLLTLTPPISPNHSFTRNSIS--ITRAETVGTITLRDHKPFKFLRFAIDDGT 72 Query: 167 GCIPCILWLNHLTSPYFS-RRNPSDVRLIAEVAAGFASLIQLGVVARVRGRITGYR 3 GCIPCILWLNH+TSP+ + RR+P D+ L+A+ AA A + + G VARVRGR+T Y+ Sbjct: 73 GCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEVAKFGNVARVRGRVTEYK 128