BLASTX nr result

ID: Panax21_contig00034505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034505
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...    84   6e-22
ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like...    81   1e-21
gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]         83   1e-21
gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]         83   1e-21
gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indi...    83   1e-20

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 1233

 Score = 84.0 bits (206), Expect(2) = 6e-22
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -3

Query: 216 NKKVFGNHSFRPNQREVINATMSIHDVFVLMPTGGGKSLTYQV 88
           NKKVFGNHSFRPNQREVINATMS  DVFVLMPTGGGKSLTYQ+
Sbjct: 451 NKKVFGNHSFRPNQREVINATMSGFDVFVLMPTGGGKSLTYQL 493



 Score = 45.1 bits (105), Expect(2) = 6e-22
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = -1

Query: 386 KYVDV*YTDGSNDKMWSSWDFPWTKKLEVSMYISLKVFDVH 264
           K+V+V Y +GSND  WSS +FPWT KLE     + KVF  H
Sbjct: 421 KFVEVNYIEGSNDPKWSSTNFPWTTKLEA---YNKKVFGNH 458


>ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
           distachyon]
          Length = 1126

 Score = 81.3 bits (199), Expect(2) = 1e-21
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -3

Query: 228 LMVNNKKVFGNHSFRPNQREVINATMSIHDVFVLMPTGGGKSLTYQV 88
           L  +NK+VFGNHSFRPNQRE+INATM   DVFVLMPTGGGKSLTYQ+
Sbjct: 355 LEAHNKRVFGNHSFRPNQREIINATMYGSDVFVLMPTGGGKSLTYQL 401



 Score = 47.0 bits (110), Expect(2) = 1e-21
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -1

Query: 389 RKYVDV*YTDGSNDKMWSSWDFPWTKKLE 303
           R  +D+ YT+GS DK WSS DFPWTK+LE
Sbjct: 328 RTNIDINYTEGSGDKKWSSKDFPWTKELE 356


>gb|AFW70084.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
          Length = 750

 Score = 83.2 bits (204), Expect(2) = 1e-21
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = -3

Query: 228 LMVNNKKVFGNHSFRPNQREVINATMSIHDVFVLMPTGGGKSLTYQVIVTLKS 70
           L   N+  FGNHSFRPNQRE+INATMS HDVFVLMPTGGGKSLTYQ+   + S
Sbjct: 431 LEAKNRNKFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALISS 483



 Score = 45.1 bits (105), Expect(2) = 1e-21
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -1

Query: 386 KYVDV*YTDGSNDKMWSSWDFPWTKKLE 303
           K +D+ YT+GS D+ WSS +FPWTK+LE
Sbjct: 405 KVIDINYTEGSGDRKWSSTNFPWTKELE 432


>gb|AFW70086.1| hypothetical protein ZEAMMB73_899248 [Zea mays]
          Length = 613

 Score = 83.2 bits (204), Expect(2) = 1e-21
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = -3

Query: 228 LMVNNKKVFGNHSFRPNQREVINATMSIHDVFVLMPTGGGKSLTYQVIVTLKS 70
           L   N+  FGNHSFRPNQRE+INATMS HDVFVLMPTGGGKSLTYQ+   + S
Sbjct: 446 LEAKNRNKFGNHSFRPNQREIINATMSGHDVFVLMPTGGGKSLTYQLPALISS 498



 Score = 45.1 bits (105), Expect(2) = 1e-21
 Identities = 17/28 (60%), Positives = 23/28 (82%)
 Frame = -1

Query: 386 KYVDV*YTDGSNDKMWSSWDFPWTKKLE 303
           K +D+ YT+GS D+ WSS +FPWTK+LE
Sbjct: 420 KVIDINYTEGSGDRKWSSTNFPWTKELE 447


>gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indica Group]
          Length = 2505

 Score = 83.2 bits (204), Expect(2) = 1e-20
 Identities = 39/47 (82%), Positives = 43/47 (91%)
 Frame = -3

Query: 228  LMVNNKKVFGNHSFRPNQREVINATMSIHDVFVLMPTGGGKSLTYQV 88
            L  NNK+VFGN SFRPNQRE+INATMS +DVFVLMPTGGGKSLTYQ+
Sbjct: 1751 LEANNKRVFGNRSFRPNQREIINATMSGNDVFVLMPTGGGKSLTYQL 1797



 Score = 41.6 bits (96), Expect(2) = 1e-20
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -1

Query: 380  VDV*YTDGSNDKMWSSWDFPWTKKLEVS 297
            +D+ YT+GS DK WSS  F WTK+LE +
Sbjct: 1727 IDISYTEGSGDKQWSSTHFAWTKELEAN 1754


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