BLASTX nr result

ID: Panax21_contig00034499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034499
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516449.1| conserved hypothetical protein [Ricinus comm...   343   2e-92
gb|AFX95947.1| green-ripe like protein 1, partial [Petunia x hyb...   340   1e-91
ref|NP_001233902.1| green ripe-like 1 [Solanum lycopersicum] gi|...   339   3e-91
gb|ABK95981.1| unknown [Populus trichocarpa]                          338   8e-91
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   337   1e-90

>ref|XP_002516449.1| conserved hypothetical protein [Ricinus communis]
           gi|223544269|gb|EEF45790.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 235

 Score =  343 bits (879), Expect = 2e-92
 Identities = 153/198 (77%), Positives = 175/198 (88%)
 Frame = -1

Query: 679 CCLVWTPLPVVSWLAPFIGHVGICREDGSVVDFSGSNLINVDDFAYGAVARYIQLDRVKC 500
           CCLVWTPLPVVSWLAPFIGHVGICREDG+++DFSGS+ +N+DDFA+GAVARY+QLDR +C
Sbjct: 37  CCLVWTPLPVVSWLAPFIGHVGICREDGTILDFSGSSFVNIDDFAFGAVARYLQLDREQC 96

Query: 499 CFPPNLAGHSCKHRYSHTEFGSAMTWDDAIQSSVRHFEHKFYNLFTCNSHSFVANCLNRL 320
           CFPPNLAGH+C H Y HTE+G+AMTWDDA+QSS+R+FEHK YNLFTCNSHSFVANCLNRL
Sbjct: 97  CFPPNLAGHTCNHGYMHTEYGTAMTWDDALQSSMRYFEHKTYNLFTCNSHSFVANCLNRL 156

Query: 319 CYSESMSWNMINVAALVLFKGQWVDSFSVLRSFLPMILVLFFGISMVGWPFLIGLLSFSV 140
           CY  SM WNM++VAAL+LFKGQW    SV+RSFLP I VL  GI +VGWPFLIGLLSFS 
Sbjct: 157 CYHRSMDWNMVSVAALILFKGQWTGWKSVIRSFLPCIGVLCLGIILVGWPFLIGLLSFSF 216

Query: 139 LLIGWFVLGTYYVKSLFE 86
           LLIGWF+LG Y +K L E
Sbjct: 217 LLIGWFLLGNYCMKYLLE 234


>gb|AFX95947.1| green-ripe like protein 1, partial [Petunia x hybrida]
          Length = 235

 Score =  340 bits (873), Expect = 1e-91
 Identities = 152/198 (76%), Positives = 173/198 (87%)
 Frame = -1

Query: 679 CCLVWTPLPVVSWLAPFIGHVGICREDGSVVDFSGSNLINVDDFAYGAVARYIQLDRVKC 500
           CCLVWTPLPVVSWLAPFIGHVGIC EDG+ V FSGSN INVDDFA+G+VA+Y+QLDR +C
Sbjct: 37  CCLVWTPLPVVSWLAPFIGHVGICTEDGNAVGFSGSNFINVDDFAFGSVAKYLQLDRKQC 96

Query: 499 CFPPNLAGHSCKHRYSHTEFGSAMTWDDAIQSSVRHFEHKFYNLFTCNSHSFVANCLNRL 320
           CFP NLA H+CKH Y HTEFGSA+TWDDAIQSS+RHFEHK YNLFTCNS+SF+A+CLNRL
Sbjct: 97  CFPRNLAAHTCKHGYKHTEFGSAITWDDAIQSSIRHFEHKSYNLFTCNSYSFLAHCLNRL 156

Query: 319 CYSESMSWNMINVAALVLFKGQWVDSFSVLRSFLPMILVLFFGISMVGWPFLIGLLSFSV 140
           CY  SM WNMINV AL+LFKG WVD+ S+LRSFLP ILV+  GI MVGWPFL+ LL+FSV
Sbjct: 157 CYGGSMDWNMINVGALLLFKGHWVDNISILRSFLPCILVVCLGIFMVGWPFLVALLAFSV 216

Query: 139 LLIGWFVLGTYYVKSLFE 86
           LL+ WF+ GTY VKSL +
Sbjct: 217 LLLAWFIFGTYCVKSLLD 234


>ref|NP_001233902.1| green ripe-like 1 [Solanum lycopersicum] gi|87244449|gb|ABD34616.1|
           green ripe-like 1 [Solanum lycopersicum]
          Length = 243

 Score =  339 bits (870), Expect = 3e-91
 Identities = 150/198 (75%), Positives = 173/198 (87%)
 Frame = -1

Query: 679 CCLVWTPLPVVSWLAPFIGHVGICREDGSVVDFSGSNLINVDDFAYGAVARYIQLDRVKC 500
           CCLVWTPLPVVSWLAPFIGHVGICREDGS V FSGSN IN+DDFA G+VA+Y+QLDR +C
Sbjct: 45  CCLVWTPLPVVSWLAPFIGHVGICREDGSAVAFSGSNFINIDDFALGSVAKYLQLDRKQC 104

Query: 499 CFPPNLAGHSCKHRYSHTEFGSAMTWDDAIQSSVRHFEHKFYNLFTCNSHSFVANCLNRL 320
           CFP NLA H+CKH Y HTEFGSA+TWDDAIQSSVRHFEHK YN+FTCNS+SFVANCLNRL
Sbjct: 105 CFPRNLAAHTCKHGYKHTEFGSAITWDDAIQSSVRHFEHKSYNIFTCNSYSFVANCLNRL 164

Query: 319 CYSESMSWNMINVAALVLFKGQWVDSFSVLRSFLPMILVLFFGISMVGWPFLIGLLSFSV 140
           CY  SM WNMINV AL+LFKG WVD+ S+LRSF P +LV+ FGI MVGWPF++ LL+FS+
Sbjct: 165 CYGGSMDWNMINVGALLLFKGHWVDNMSILRSFSPFMLVVCFGIFMVGWPFMVALLAFSL 224

Query: 139 LLIGWFVLGTYYVKSLFE 86
           LL+ WF+ GTY +K+L +
Sbjct: 225 LLLAWFIFGTYCLKNLLD 242


>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  338 bits (866), Expect = 8e-91
 Identities = 144/198 (72%), Positives = 172/198 (86%)
 Frame = -1

Query: 679 CCLVWTPLPVVSWLAPFIGHVGICREDGSVVDFSGSNLINVDDFAYGAVARYIQLDRVKC 500
           CCL+WTPLPVVSWLAPFIGHVGICREDG+++DFSGSN +NVDDF++GA ARY QLDR +C
Sbjct: 45  CCLIWTPLPVVSWLAPFIGHVGICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQC 104

Query: 499 CFPPNLAGHSCKHRYSHTEFGSAMTWDDAIQSSVRHFEHKFYNLFTCNSHSFVANCLNRL 320
           CFPPNL GH+CKH Y H+E+G+A+TWDDA+QSS+RHF+HK YNLFTCN HSFVANCLNRL
Sbjct: 105 CFPPNLTGHTCKHGYKHSEYGTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRL 164

Query: 319 CYSESMSWNMINVAALVLFKGQWVDSFSVLRSFLPMILVLFFGISMVGWPFLIGLLSFSV 140
           CY  SM WNMI+VA L+LFKG W+D  S++RSFLP  + L  G+ +VGWPFL+GL SFS+
Sbjct: 165 CYGGSMDWNMIDVAVLILFKGHWIDWKSIVRSFLPFAVALCIGVCLVGWPFLVGLFSFSL 224

Query: 139 LLIGWFVLGTYYVKSLFE 86
           LL+GWF+LGTY  KSL E
Sbjct: 225 LLMGWFLLGTYCFKSLLE 242


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  337 bits (864), Expect = 1e-90
 Identities = 149/198 (75%), Positives = 175/198 (88%)
 Frame = -1

Query: 679 CCLVWTPLPVVSWLAPFIGHVGICREDGSVVDFSGSNLINVDDFAYGAVARYIQLDRVKC 500
           CCLVW PLPVVSWLAPFIGHVGICREDG+V+DFSGS  +NVDDFA+G VARY++LDR +C
Sbjct: 38  CCLVWNPLPVVSWLAPFIGHVGICREDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQC 97

Query: 499 CFPPNLAGHSCKHRYSHTEFGSAMTWDDAIQSSVRHFEHKFYNLFTCNSHSFVANCLNRL 320
           CFPPNL+GH+CKH Y HTE+G+A+TWDDA+++S+RHFE K YNLFTCN HSFVAN LNRL
Sbjct: 98  CFPPNLSGHTCKHGYRHTEYGTAITWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRL 157

Query: 319 CYSESMSWNMINVAALVLFKGQWVDSFSVLRSFLPMILVLFFGISMVGWPFLIGLLSFSV 140
           CY  SMSWNM+NV  L+LFKG WVD +SV+RSFLP ++V+  GI MVGWPFL+GLLSFS+
Sbjct: 158 CYGGSMSWNMVNVGILILFKGHWVDFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSL 217

Query: 139 LLIGWFVLGTYYVKSLFE 86
           LLIGWF+LGTY VKSL E
Sbjct: 218 LLIGWFLLGTYLVKSLLE 235


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