BLASTX nr result

ID: Panax21_contig00034496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034496
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   137   9e-31
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...   121   6e-26
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...   111   7e-23
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...   101   7e-20
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    88   8e-16

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  137 bits (346), Expect = 9e-31
 Identities = 63/128 (49%), Positives = 89/128 (69%)
 Frame = -3

Query: 386 MSDYIPHELLIEILTRLPAKSLLRFTSVCKSWYSLITNPSFITTHLNHTISNNQNNETLL 207
           M D+IP E+LI+I  RLP K LLR   +CK+WYSLI+N +FI+TH  +TI +N NN  L+
Sbjct: 1   MLDHIPKEVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNY-LI 59

Query: 206 LRYYDRNEMKENYTVHHDDETFGKQFSQLEFPFKSPIGYFRIVGCCNGLICLLDDLFGDM 27
           LR+Y R+  KE + +H DD+    ++ +L+FP +S   YF IVG CNG+ICL D+    +
Sbjct: 60  LRHYSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDNHSHIL 119

Query: 26  ESIILWNP 3
           + I+LWNP
Sbjct: 120 KRIVLWNP 127


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score =  121 bits (304), Expect = 6e-26
 Identities = 64/128 (50%), Positives = 82/128 (64%)
 Frame = -3

Query: 386 MSDYIPHELLIEILTRLPAKSLLRFTSVCKSWYSLITNPSFITTHLNHTISNNQNNETLL 207
           MSDY+  +L+ EIL +LP KSLLR TS+CKSW SLI +P+FI  HL HTIS+       L
Sbjct: 1   MSDYLSEDLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHLQHTISSTDRQNLFL 60

Query: 206 LRYYDRNEMKENYTVHHDDETFGKQFSQLEFPFKSPIGYFRIVGCCNGLICLLDDLFGDM 27
           LR   R E +E Y++  D++ F +   QL FPFKS   YF ++G  NGLICL +     +
Sbjct: 61  LRLCSR-EREEQYSLRLDNQDFNEHM-QLHFPFKSSESYFHVIGSSNGLICLANIFQSLI 118

Query: 26  ESIILWNP 3
            S ILWNP
Sbjct: 119 VSFILWNP 126


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score =  111 bits (278), Expect = 7e-23
 Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 4/132 (3%)
 Frame = -3

Query: 386 MSDYIPHELLIEILTRLPAKSLLRFTSVCKSWYSLITNPSFITTHLNHTIS-NNQNNETL 210
           M + IP E+LIEIL RLP KSLL++  VC+SW+SLITN SFI+TH+NH+I  NN+ +   
Sbjct: 1   MLENIPQEILIEILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYA 60

Query: 209 LLRYYDRNEMKENYTVHHDDETFGKQF---SQLEFPFKSPIGYFRIVGCCNGLICLLDDL 39
           L++     + KE + ++ DD++  + F    +L+FPFK    Y  I+  CNGL+CL D  
Sbjct: 61  LVKQKSVPDCKERFILYIDDDSGDEPFRVYQELDFPFKGE-RYLEIISSCNGLVCLSDSQ 119

Query: 38  FGDMESIILWNP 3
           +       LWNP
Sbjct: 120 YA---RFYLWNP 128


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score =  101 bits (252), Expect = 7e-20
 Identities = 52/128 (40%), Positives = 76/128 (59%)
 Frame = -3

Query: 386 MSDYIPHELLIEILTRLPAKSLLRFTSVCKSWYSLITNPSFITTHLNHTISNNQNNETLL 207
           MS Y+PHE+L  I   LP K+L+  + V KSW S++ NP FI+TH N +++ N+    L 
Sbjct: 1   MSGYLPHEVLFNIFLNLPPKTLILCSCVSKSWRSVVANPIFISTHRNQSLTCNRKLLILG 60

Query: 206 LRYYDRNEMKENYTVHHDDETFGKQFSQLEFPFKSPIGYFRIVGCCNGLICLLDDLFGDM 27
             YY+R E K  Y++H D +T    + +L+FPF +  G  +IVG  NGL+C L       
Sbjct: 61  RYYYNRTEPKVRYSLHFDTDTL-DLYQELKFPFPNSNGDLKIVGVSNGLVCFLG------ 113

Query: 26  ESIILWNP 3
             ++LWNP
Sbjct: 114 LDLLLWNP 121


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
 Frame = -3

Query: 386 MSDYIPHELLIEILTRLPAKSLLRFTSVCKSWYSLITNPSFITTHLNHTISNNQNNET-- 213
           M D +P E+L  I  +LP+++L+  T V K W SLIT+P+F+ +HLN + +N+  N    
Sbjct: 1   MLDSLPPEILFYIFLKLPSRTLILCTCVSKPWRSLITDPAFLLSHLNQSNTNHHRNRNRL 60

Query: 212 LLLR--YYDRNEMKENYTVHHDDETFGKQFSQLEFPFKSPIGYFRIVGCCNGLICLLDDL 39
           LLLR  Y    +  E Y++H D +T G  + +L+ P  +    F++VG  NGL+CLL   
Sbjct: 61  LLLRRCYSTATKKAERYSLHFDSDTLG-IYKELKLPHVNWNQSFKLVGSSNGLLCLLG-- 117

Query: 38  FGDMESIILWNP 3
               ++I  WNP
Sbjct: 118 ----QNIFFWNP 125


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