BLASTX nr result

ID: Panax21_contig00034457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034457
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513472.1| sorting and assembly machinery (sam50) prote...    57   1e-06

>ref|XP_002513472.1| sorting and assembly machinery (sam50) protein, putative [Ricinus
           communis] gi|223547380|gb|EEF48875.1| sorting and
           assembly machinery (sam50) protein, putative [Ricinus
           communis]
          Length = 700

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 51/140 (36%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
 Frame = +2

Query: 122 MPQNDGIRFTSSSIKIPSVSFHHQQHNCLLPLFASLHLSKTSNSIIQFVDSL----KNPV 289
           MPQND +RFTSSS+KIP +    QQ         +  LS T  S   F+DSL    K  +
Sbjct: 1   MPQNDTVRFTSSSLKIPLLPPPQQQQQ-------APQLSYTKISFTNFIDSLITRSKIHI 53

Query: 290 TQFINS---LKLP----SNILNSSNNQRKTNPFHXXXXXXXXXXXXXTRPDEG-SAVTQP 445
           ++ +NS   L LP    +++    +     +  H             T+P E  + VTQ 
Sbjct: 54  SRSVNSPRKLTLPLLCFASLSLPQSKDTVISESHTQSPILCSASLSLTQPGESENIVTQQ 113

Query: 446 K--SGGQSASRNDEERVLIS 499
           K   GG S SR+DEERVLIS
Sbjct: 114 KGSGGGLSGSRHDEERVLIS 133


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