BLASTX nr result

ID: Panax21_contig00034456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034456
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 ...    78   7e-13
ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-...    76   3e-12
ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-...    72   5e-11
ref|XP_003536930.1| PREDICTED: LOB domain-containing protein 16-...    71   1e-10
ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002263559.1| PREDICTED: LOB domain-containing protein 16 [Vitis vinifera]
           gi|297744118|emb|CBI37088.3| unnamed protein product
           [Vitis vinifera]
          Length = 195

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
 Frame = +2

Query: 56  QLMAQTLIDSRNAENQWPAGGNNTATW--FPAYNPSNYMSPQSSLESIDYNNEGMNIQEI 229
           QL AQ   ++ N ENQW    +   ++  FP Y   N +SPQ SLE ID+N++GM +Q+I
Sbjct: 104 QLKAQLANNTGNLENQWQGNVSGAPSFQNFPGY--MNSVSPQCSLELIDHNSDGMTMQDI 161

Query: 230 QSKDDQFFSYQPANYKKRPAASQTDLGELQALARRMMRN 346
           QS+D+  FS+Q  + K+ P     DLGELQ LA RMMRN
Sbjct: 162 QSRDE--FSFQTCSRKRPP---HNDLGELQELALRMMRN 195


>ref|XP_003554283.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 55/109 (50%), Positives = 73/109 (66%), Gaps = 9/109 (8%)
 Frame = +2

Query: 47  VKSQLMAQTLIDSRNAEN--QWPAGGNNTATWFPAYNP-----SNYMSPQSSLESIDYN- 202
           VK+QL AQ L++SRN E+  QW  G NN+ +  P  +P      N +SPQSSLESID++ 
Sbjct: 113 VKAQL-AQNLVESRNIESNHQW-TGNNNSVSGQPMNHPFCPTYMNPISPQSSLESIDHSS 170

Query: 203 -NEGMNIQEIQSKDDQFFSYQPANYKKRPAASQTDLGELQALARRMMRN 346
            N+GM++Q+IQS++D  F  Q    K+RP  +  DLGELQ LA RMMRN
Sbjct: 171 INDGMSMQDIQSRED--FQIQA---KERPY-NNNDLGELQELALRMMRN 213


>ref|XP_003521280.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 53/110 (48%), Positives = 68/110 (61%), Gaps = 10/110 (9%)
 Frame = +2

Query: 47  VKSQLMAQTLIDSRNAENQWPAGGNNTAT--------WFPAYNPSNYMSPQSSLESIDYN 202
           VK+QL  Q L++SRN EN     GNN           + P Y   N +SPQSSLESID++
Sbjct: 113 VKAQL-TQNLVESRNIENNHHLQGNNNNVTGQLMNHPFCPTY--MNPISPQSSLESIDHS 169

Query: 203 --NEGMNIQEIQSKDDQFFSYQPANYKKRPAASQTDLGELQALARRMMRN 346
             N+GM++Q+IQS++D  F  Q    K+RP  +  DLGELQ LA RMMRN
Sbjct: 170 SINDGMSMQDIQSRED--FQIQA---KERPY-NNNDLGELQELALRMMRN 213


>ref|XP_003536930.1| PREDICTED: LOB domain-containing protein 16-like [Glycine max]
          Length = 213

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/105 (42%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
 Frame = +2

Query: 47  VKSQLMAQTLIDSRNAENQWPAGGNNTATWFPAYNPS---NYMSPQSSLESIDYN--NEG 211
           +K+QL  Q  ++ RN EN W     N A  F  + P+   N +SPQSSL+S+ Y+  N+G
Sbjct: 113 MKAQL-DQNHMEPRNFENHW---SENVAQSFNPFCPTSMNNLISPQSSLDSLGYSSINDG 168

Query: 212 MNIQEIQSKDDQFFSYQPANYKKRPAASQTDLGELQALARRMMRN 346
           M++ ++QS  +++F+ Q  N KKR  +   DLGELQ LA RM+RN
Sbjct: 169 MSMLDVQSSREEYFALQACNSKKR--SYNNDLGELQELALRMIRN 211


>ref|XP_002302057.1| predicted protein [Populus trichocarpa] gi|222843783|gb|EEE81330.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 11/111 (9%)
 Frame = +2

Query: 47  VKSQLMAQTLIDS-----RNAENQWPAGGNNTATWFPAYNPS-NYMSPQSSLESIDYNNE 208
           VK+QL AQ LIDS      N  +QW     +  + FP+Y    N +SPQSSL+S+D NN 
Sbjct: 108 VKAQL-AQNLIDSTRINIENTHHQWQGNNISGVSSFPSYQTYINPISPQSSLDSVDLNNS 166

Query: 209 G-----MNIQEIQSKDDQFFSYQPANYKKRPAASQTDLGELQALARRMMRN 346
                 M++Q+I+S ++  F++Q     KRP  S  DLGELQALA RMMRN
Sbjct: 167 NIDHGMMDMQDIKSGEE--FAFQSCAKVKRPYNS--DLGELQALALRMMRN 213


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