BLASTX nr result

ID: Panax21_contig00034446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034446
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|XP_002318336.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39
ref|XP_002270758.2| PREDICTED: uncharacterized protein At4g15970...   164   1e-38
ref|XP_002521882.1| pentatricopeptide repeat-containing protein,...   160   1e-37
ref|NP_193730.1| uncharacterized protein [Arabidopsis thaliana] ...   156   2e-36

>ref|XP_002329694.1| predicted protein [Populus trichocarpa] gi|222870602|gb|EEF07733.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  174 bits (441), Expect = 9e-42
 Identities = 93/168 (55%), Positives = 117/168 (69%), Gaps = 6/168 (3%)
 Frame = +1

Query: 88  HHIQQLFHQ-VPRIMLLF-ATAVLACLVLYDSAYPFQLFPSAF----NQSLVKGNISSYV 249
           H    L H+ V RI +LF     ++CLVLY SA PF+  PS+     + SL      +Y 
Sbjct: 14  HSSSGLIHKPVVRITVLFLGVLAVSCLVLYKSANPFEFPPSSLGSSDSDSLSVLYHQTYK 73

Query: 250 SSIDLNLKTVLEKASMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVI 429
             +DL L  VL KASM   TVILTTLN+AWA P S+FDLFLESFQIG +T +LL+++V+I
Sbjct: 74  RKVDLELGRVLNKASMKGNTVILTTLNDAWAEPGSIFDLFLESFQIGEKTKELLNNLVII 133

Query: 430 GLDEKAYARCLKIHPHCYALTSDGTNFSGEAGFMTPDYLKMMWMRIDF 573
            LD+KA+ARCL IHPHCYAL ++G NF+ EA FM+ DYLKMMW RI+F
Sbjct: 134 SLDQKAHARCLAIHPHCYALKTEGLNFTREASFMSEDYLKMMWRRIEF 181


>ref|XP_002318336.1| predicted protein [Populus trichocarpa] gi|222859009|gb|EEE96556.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  165 bits (418), Expect = 4e-39
 Identities = 80/154 (51%), Positives = 112/154 (72%), Gaps = 3/154 (1%)
 Frame = +1

Query: 121 RIMLLF-ATAVLACLVLYDSAYPFQLFPSAFNQSLVKGNISSYVSS--IDLNLKTVLEKA 291
           RI +LF     ++C+VLY SAY F+  P + + S     + +  S    DL L+ +L+ A
Sbjct: 2   RITVLFLGVLAVSCIVLYKSAYHFEFLPGSSSDSDSLSMLDNRTSKGKFDLELEGILKNA 61

Query: 292 SMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVIGLDEKAYARCLKIH 471
           S  ++TVILTTLN+AWA P S+FDLFLESFQ+G+ T KL++++++I +D+KA+ARCL IH
Sbjct: 62  STKHKTVILTTLNQAWAEPGSIFDLFLESFQVGDNTQKLVNNLIIISMDQKAHARCLAIH 121

Query: 472 PHCYALTSDGTNFSGEAGFMTPDYLKMMWMRIDF 573
           PHCYAL ++G NFS EA FM+ +YLKMMW RI+F
Sbjct: 122 PHCYALRTEGLNFSSEAYFMSEEYLKMMWRRIEF 155


>ref|XP_002270758.2| PREDICTED: uncharacterized protein At4g15970-like [Vitis vinifera]
          Length = 373

 Score =  164 bits (414), Expect = 1e-38
 Identities = 83/155 (53%), Positives = 113/155 (72%)
 Frame = +1

Query: 109 HQVPRIMLLFATAVLACLVLYDSAYPFQLFPSAFNQSLVKGNISSYVSSIDLNLKTVLEK 288
           +++ +IML  A  VL  +VL+ SAY  Q  P+  ++S +K       S +D+    VLEK
Sbjct: 38  YRIAKIMLFMAVVVLPGMVLHKSAYSSQFLPALISRSELKE------SPLDI----VLEK 87

Query: 289 ASMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVIGLDEKAYARCLKI 468
           A+M ++TVILTT+N AWAA NS+ DLFLESF IGN T +LL+H+V+I LD+K+YARCL +
Sbjct: 88  AAMGDKTVILTTVNGAWAANNSLLDLFLESFHIGNNTKRLLNHLVIIALDQKSYARCLAL 147

Query: 469 HPHCYALTSDGTNFSGEAGFMTPDYLKMMWMRIDF 573
           HP CYAL ++G +FSGEA + TP+YL+MMW RIDF
Sbjct: 148 HPLCYALKTEGVDFSGEAYYSTPNYLEMMWRRIDF 182


>ref|XP_002521882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538920|gb|EEF40518.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 394

 Score =  160 bits (406), Expect = 1e-37
 Identities = 85/157 (54%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +1

Query: 115 VPRIMLLFATAVLACLVLYDSAYP--FQLFPSAFNQSLVKGNIS--SYVSSIDLNLKTVL 282
           VPR +L+F    L CL+LY ++    F  FPSA    +    +   S   S +  L+ VL
Sbjct: 45  VPRGVLVFGFMSLCCLLLYGASDSPRFLSFPSASLPYIFPSAVDTDSLPVSNEQKLEKVL 104

Query: 283 EKASMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVIGLDEKAYARCL 462
           ++A+M ++TVILTTLNEAWAAPNSV DLFL SF++G  T KLL+H+V+I LD+KA ARC+
Sbjct: 105 KEAAMKDKTVILTTLNEAWAAPNSVIDLFLASFRLGEHTRKLLNHLVIIALDQKANARCI 164

Query: 463 KIHPHCYALTSDGTNFSGEAGFMTPDYLKMMWMRIDF 573
           ++H HC+AL +DG +FS EA FMTP YLKMMW RIDF
Sbjct: 165 QVHDHCFALLTDGIDFSNEAYFMTPAYLKMMWRRIDF 201


>ref|NP_193730.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2827651|emb|CAA16605.1| putative protein [Arabidopsis
           thaliana] gi|7268792|emb|CAB78997.1| putative protein
           [Arabidopsis thaliana] gi|332658853|gb|AEE84253.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 715

 Score =  156 bits (395), Expect = 2e-36
 Identities = 83/160 (51%), Positives = 105/160 (65%), Gaps = 12/160 (7%)
 Frame = +1

Query: 127 MLLFATAVLACLVLYDSAYPFQLFPSAFNQSLVKGNISS------------YVSSIDLNL 270
           +L+    + ACL+LY +AYP        +Q L   N+SS               S  ++ 
Sbjct: 390 ILVLVLGLAACLLLYKTAYPL-------HQELDVNNLSSRPLLDHTSSSSPLTRSKSISF 442

Query: 271 KTVLEKASMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVIGLDEKAY 450
           + VLE AS  NRTVI+TTLN+AWA PNS+FDLFLESF+IG  T KLL HVVV+ LD KA+
Sbjct: 443 REVLENASTENRTVIVTTLNQAWAEPNSLFDLFLESFRIGQGTKKLLQHVVVVCLDSKAF 502

Query: 451 ARCLKIHPHCYALTSDGTNFSGEAGFMTPDYLKMMWMRID 570
           ARC ++HP+CY L + GT+FSGE  F TPDYLKMMW RI+
Sbjct: 503 ARCSQLHPNCYYLKTTGTDFSGEKLFATPDYLKMMWRRIE 542



 Score =  131 bits (329), Expect = 9e-29
 Identities = 71/161 (44%), Positives = 98/161 (60%), Gaps = 9/161 (5%)
 Frame = +1

Query: 115 VPRIMLLFATAVLACLVLYDSAY-PFQLFPSAFNQSLVKGNISSYVSSID-------LNL 270
           V RI+LL  T  L+CL+ Y SA  P  +  S +        +++  SS           L
Sbjct: 43  VIRIVLLVTTVTLSCLLFYKSANNPLNMVFSPWKTDCYASKLTNESSSKTEPKKEPVSEL 102

Query: 271 KTVLEKASMANRTVILTTLNEAWAAPNSVFDLFLESFQIGNQTLKLLDHVVVIGLDEKAY 450
           + VL  A+M + TVI+T LN+AWA PNS FD+F ESF++G +T +LL HV+ + LD KAY
Sbjct: 103 ERVLMNAAMEDNTVIITALNQAWAEPNSTFDVFRESFKVGIETERLLKHVIAVCLDIKAY 162

Query: 451 ARCLKIHPHCYAL-TSDGTNFSGEAGFMTPDYLKMMWMRID 570
            +CLK+HPHCY +  +D    SG   FMTP YLK++W R+D
Sbjct: 163 DQCLKVHPHCYLINATDSDQLSGPNRFMTPGYLKLIWRRMD 203


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