BLASTX nr result

ID: Panax21_contig00034442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034442
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containi...   155   4e-36
emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]   154   6e-36
ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|2...   151   5e-35
ref|XP_003598203.1| Pentatricopeptide repeat-containing protein ...   149   2e-34
ref|XP_002512558.1| pentatricopeptide repeat-containing protein,...   149   2e-34

>ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
           mitochondrial [Vitis vinifera]
           gi|296088528|emb|CBI37519.3| unnamed protein product
           [Vitis vinifera]
          Length = 525

 Score =  155 bits (391), Expect = 4e-36
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +1

Query: 1   YTLLIHALCEKQKWKKACQFFVEMIEKGILPQKVTFETLYRGLIQSDMLRTWRRLKKKLE 180
           YTLLIH LCEKQKWK+AC FFVEMIEKG LPQK+TFETLYRGLIQSDML+TWRRLKKKLE
Sbjct: 446 YTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLE 505

Query: 181 EESITFGSEFEHYHLKPYRR 240
           EESITFGSEF+ YH KPYRR
Sbjct: 506 EESITFGSEFQQYHFKPYRR 525


>emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
          Length = 525

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +1

Query: 1   YTLLIHALCEKQKWKKACQFFVEMIEKGILPQKVTFETLYRGLIQSDMLRTWRRLKKKLE 180
           YTLLIH LCEKQKWK+AC FFVEMIEKG LPQK+TFETLYRGLIQSDML+TWRRLKKKLE
Sbjct: 446 YTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLE 505

Query: 181 EESITFGSEFEHYHLKPYRR 240
           EESITFGSEF+ YH KPYRR
Sbjct: 506 EESITFGSEFQXYHFKPYRR 525


>ref|XP_002306265.1| predicted protein [Populus trichocarpa] gi|222855714|gb|EEE93261.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  151 bits (382), Expect = 5e-35
 Identities = 68/80 (85%), Positives = 78/80 (97%)
 Frame = +1

Query: 1   YTLLIHALCEKQKWKKACQFFVEMIEKGILPQKVTFETLYRGLIQSDMLRTWRRLKKKLE 180
           YT+LIH LCEK+KW++AC+FFVEMIEKG+LPQKVTFETLY+GLIQSDMLRTWRRLKKKL+
Sbjct: 469 YTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLD 528

Query: 181 EESITFGSEFEHYHLKPYRR 240
           EESITFGSEF++Y LKPYRR
Sbjct: 529 EESITFGSEFQNYQLKPYRR 548


>ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487251|gb|AES68454.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 503

 Score =  149 bits (376), Expect = 2e-34
 Identities = 66/80 (82%), Positives = 77/80 (96%)
 Frame = +1

Query: 1   YTLLIHALCEKQKWKKACQFFVEMIEKGILPQKVTFETLYRGLIQSDMLRTWRRLKKKLE 180
           YT+LIH LCE +KW++ACQ+FVEMIEKG LPQKVTFETLYRGLIQSDMLRTWRRLKK+L+
Sbjct: 424 YTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRLD 483

Query: 181 EESITFGSEFEHYHLKPYRR 240
           +ESITFGSEF++YHLKPY+R
Sbjct: 484 QESITFGSEFQNYHLKPYKR 503


>ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548519|gb|EEF50010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 511

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +1

Query: 1   YTLLIHALCEKQKWKKACQFFVEMIEKGILPQKVTFETLYRGLIQSDMLRTWRRLKKKLE 180
           YTLL+H LCEKQKW+KACQFFVEMIEKG+LPQK TFE LY GLIQS+MLRTWRRLKKKL+
Sbjct: 432 YTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLD 491

Query: 181 EESITFGSEFEHYHLKPYRR 240
           EESI FGSEF +YHLKPYRR
Sbjct: 492 EESIAFGSEFSNYHLKPYRR 511


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