BLASTX nr result

ID: Panax21_contig00034428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034428
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23170.3| unnamed protein product [Vitis vinifera]              161   6e-38
dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]    125   3e-27
ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l...   121   7e-26
ref|NP_001169273.1| uncharacterized protein LOC100383136 [Zea ma...   119   3e-25
ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group] g...   115   3e-24

>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  161 bits (407), Expect = 6e-38
 Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 22/181 (12%)
 Frame = -2

Query: 477 DILAEGTNPVVVRSHDERKKLLSRETCTIRNGDVIELIPGHHFFKFVATCGEKNSSSPNQ 298
           D + EGTNPVVV S ++RKKL + E   I N D+IELIPGH+FFK+V   GEK     N 
Sbjct: 62  DAVVEGTNPVVVASGNQRKKLRTGEKAVITNDDIIELIPGHYFFKYVTVAGEKCEKKGNS 121

Query: 297 HKRASNEGNKVSEEDEFLSRKRIRQVSQDEVFARNLQAEFNNDSPVNERS---------- 148
               + E N+VS     LSRKR+RQVS+DE FAR LQAE  ND  V ERS          
Sbjct: 122 MDAQNMESNEVS-----LSRKRMRQVSEDEAFARKLQAEMENDVLVQERSLVTGKSGYSQ 176

Query: 147 ------------PEAIRCFSPNKDKLPSIFRLMKVKGLPAWANTNAVSIGDVIQGNVLVA 4
                        EAIR FS  KD LP  +RL++VK LPAWANT++VSI DVIQG+VL+A
Sbjct: 177 ASTASIPSSHMNSEAIRHFSIPKDNLPLTYRLLRVKDLPAWANTSSVSIRDVIQGDVLIA 236

Query: 3   V 1
           V
Sbjct: 237 V 237


>dbj|BAK06716.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  125 bits (315), Expect = 3e-27
 Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 14/173 (8%)
 Frame = -2

Query: 477 DILAEGTNPVVVRSHDERKKLLSRETCTIRNGDVIELIPGHHFFKFVATCGEKN-SSSPN 301
           +++ EGTNP+VVRS  +R+K+ +++   I   DV+ELIPG +F K+V    E+  S+S +
Sbjct: 70  EVVVEGTNPIVVRSEGQRRKVCAQQRAKIMPDDVLELIPGEYFMKYVNMSDERKISASVD 129

Query: 300 QHKRASNEGNKVSEEDEFLSRKRIRQVSQDEVFARNLQAEFNNDSPV------------- 160
            H     +G + SEED  ++ KR RQV +DE  AR LQ  F  +S               
Sbjct: 130 SHDL--KKGKRHSEEDS-VAAKRNRQVMEDEALARTLQESFAEESASVTEVLSSLDSAGS 186

Query: 159 NERSPEAIRCFSPNKDKLPSIFRLMKVKGLPAWANTNAVSIGDVIQGNVLVAV 1
           +ER+ E      P KD LP  FRLM+V+GLP+W NT+ V+I DVIQG VL+AV
Sbjct: 187 SERNKERTHSVGPLKDVLPLSFRLMRVQGLPSWTNTSTVTIQDVIQGEVLLAV 239


>ref|XP_004155668.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Cucumis sativus]
          Length = 959

 Score =  121 bits (303), Expect = 7e-26
 Identities = 74/172 (43%), Positives = 96/172 (55%), Gaps = 12/172 (6%)
 Frame = -2

Query: 480 ADILAEGTNPVVVRSHDERKKLLSRETCTIRNGDVIELIPGHHFFKFVATCGEKNSSSPN 301
           A +L +GTNPVV+ S D RKKL  RE+  IR+GDVIELIPGH+ FK+ + C      S  
Sbjct: 374 AKLLVDGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFNSRPGS-- 431

Query: 300 QHKRASNEGNKVSEEDEFLSRKRIRQVSQDEVFAR------------NLQAEFNNDSPVN 157
                           E L +KR+RQV+ D++  R            N+Q+  +     N
Sbjct: 432 ----------------EDLGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSKSKEAN 475

Query: 156 ERSPEAIRCFSPNKDKLPSIFRLMKVKGLPAWANTNAVSIGDVIQGNVLVAV 1
             S EAIR F    D+LP  FRL+ VKGLP WANT+ V I D+IQG++L AV
Sbjct: 476 --SVEAIRNFHIPDDRLPMTFRLLSVKGLPPWANTSCVRITDIIQGDILFAV 525


>ref|NP_001169273.1| uncharacterized protein LOC100383136 [Zea mays]
           gi|224028313|gb|ACN33232.1| unknown [Zea mays]
           gi|414886956|tpg|DAA62970.1| TPA: hypothetical protein
           ZEAMMB73_115946 [Zea mays] gi|414886957|tpg|DAA62971.1|
           TPA: hypothetical protein ZEAMMB73_115946 [Zea mays]
          Length = 665

 Score =  119 bits (298), Expect = 3e-25
 Identities = 69/177 (38%), Positives = 99/177 (55%), Gaps = 18/177 (10%)
 Frame = -2

Query: 477 DILAEGTNPVVVRSHDERKKLLSRETCTIRNGDVIELIPGHHFFKFVATCGEKNSSSPNQ 298
           +++ EG NP++VRS  +R+K+ ++ET  I +GDV+ELIPG +F K+V    +        
Sbjct: 67  EVVVEGPNPIIVRSKGQRRKVCAKETAKIAHGDVLELIPGDYFVKYV----DMGDEHVPM 122

Query: 297 HKRASNEGNKVSEEDEFLSRKRIRQVSQDEVFARNLQAEFNNDSPV-------------- 160
           H     +G + SEE    + KRIRQ+ +DE  A+ LQ  F  D                 
Sbjct: 123 HLSDLMKGKRYSEEHG-AAVKRIRQIMEDEALAKTLQESFAADDAAVSGMPSGQKISSHD 181

Query: 159 ----NERSPEAIRCFSPNKDKLPSIFRLMKVKGLPAWANTNAVSIGDVIQGNVLVAV 1
               +ER+ +      P KD LP  FRLM V+GLP+W NT++V+I DVIQG VL+AV
Sbjct: 182 SAGSSERNNDRTHSVGPLKDMLPLTFRLMHVQGLPSWTNTSSVTIQDVIQGEVLLAV 238


>ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group]
           gi|33146648|dbj|BAC79984.1| putative tyrosyl-DNA
           phosphodiesterase [Oryza sativa Japonica Group]
           gi|113611380|dbj|BAF21758.1| Os07g0530100 [Oryza sativa
           Japonica Group] gi|215697362|dbj|BAG91356.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222637174|gb|EEE67306.1| hypothetical protein
           OsJ_24533 [Oryza sativa Japonica Group]
          Length = 671

 Score =  115 bits (289), Expect = 3e-24
 Identities = 67/177 (37%), Positives = 102/177 (57%), Gaps = 18/177 (10%)
 Frame = -2

Query: 477 DILAEGTNPVVVRSHDERKKLLSRETCTIRNGDVIELIPGHHFFKFVATCGEKNSSSPNQ 298
           + + EG NP++VRS  +R+K+ ++E   I + DV+ELIPG +F K++   G+ + SS + 
Sbjct: 67  EAVVEGPNPIIVRSEGQRRKVCAQERVKIAHDDVLELIPGEYFVKYL-NVGDNHKSSTSM 125

Query: 297 HKRASNEGNKVSEEDEFLSRKRIRQVSQDEVFARNLQAEFNNDSPV-------------- 160
                 +G ++ E+D  +  KR RQ+ +DE  AR+LQ  F  +S                
Sbjct: 126 GSSDFKKGKRLCEDDTVVI-KRNRQIMEDEALARSLQKSFAEESSTISGLGCDQMLSSLD 184

Query: 159 ----NERSPEAIRCFSPNKDKLPSIFRLMKVKGLPAWANTNAVSIGDVIQGNVLVAV 1
               +ER+ E I      KD L   FRLM+V+GLP+W NT++V+I DVIQG VL+AV
Sbjct: 185 SAGFSERNNERIHSVDYLKDVLSLTFRLMRVQGLPSWTNTSSVTIQDVIQGEVLLAV 241


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