BLASTX nr result

ID: Panax21_contig00034422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034422
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002528689.1| pentatricopeptide repeat-containing protein,...   139   3e-31
gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japo...   114   1e-23
ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g...   114   1e-23
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ...   110   2e-22

>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  150 bits (379), Expect = 1e-34
 Identities = 67/110 (60%), Positives = 85/110 (77%)
 Frame = -3

Query: 330 VQGNEHQLVLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQPNV 151
           V  NE  LVL+LYS LS + LEP+  T+S+++RC+CKK DP EA R L++M++ GF PNV
Sbjct: 152 VTANESDLVLKLYSGLSCYSLEPNSWTFSIMVRCHCKKKDPGEAKRVLDQMMQKGFNPNV 211

Query: 150 AIFTELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
           A  T LINSFCK G++   F+VFEVM R+GC+P I TYNCLLKG+CYVGR
Sbjct: 212 ATLTILINSFCKMGQLQNTFQVFEVMDRIGCKPNIQTYNCLLKGMCYVGR 261



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
 Frame = -3

Query: 366 KPNLDKRICRLHVQGNEHQL--VLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANR 193
           KPN+    C L       ++    EL   +    +EPD  TY+ ++  +CK     EA  
Sbjct: 243 KPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAME 302

Query: 192 ALNEMVKNGFQPNVAIFTELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLC 13
            LNE ++ G  PNV  F  L++ + K GR  K F V ++M +  C P   +Y+ LL GL 
Sbjct: 303 LLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLL 362

Query: 12  YVGR 1
             G+
Sbjct: 363 LWGK 366


>ref|XP_002528689.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531861|gb|EEF33678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 271

 Score =  139 bits (349), Expect = 3e-31
 Identities = 60/110 (54%), Positives = 82/110 (74%)
 Frame = -3

Query: 330 VQGNEHQLVLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQPNV 151
           V  NE  L L +YS +S+  L PD  T+S++IRC+CK++D  EA R L+ M++NG  PNV
Sbjct: 98  VIANELDLALNMYSDVSTLGLVPDSWTFSIVIRCHCKRNDADEAKRVLDRMLENGLNPNV 157

Query: 150 AIFTELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
             FT LINSFCK+G++ KA+EV +VM  +GC+P + TYNCLLKGLCY+G+
Sbjct: 158 VTFTTLINSFCKKGKLQKAYEVIDVMNTIGCQPNVQTYNCLLKGLCYIGK 207



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/115 (29%), Positives = 57/115 (49%)
 Frame = -3

Query: 345 ICRLHVQGNEHQLVLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNG 166
           + R H + N+      +   +    L P+  T++ LI  +CKK    +A   ++ M   G
Sbjct: 128 VIRCHCKRNDADEAKRVLDRMLENGLNPNVVTFTTLINSFCKKGKLQKAYEVIDVMNTIG 187

Query: 165 FQPNVAIFTELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
            QPNV  +  L+   C  G++ +A+E+ E + +   EP I TY  ++ G C VGR
Sbjct: 188 CQPNVQTYNCLLKGLCYIGKVEEAYEILEDIKKSSIEPDIYTYTAMMDGFCKVGR 242


>gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
          Length = 523

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/106 (49%), Positives = 70/106 (66%)
 Frame = -3

Query: 318 EHQLVLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQPNVAIFT 139
           +H   + L+ AL    + PD  +Y+  ++C C+K  P EA  AL+EMV  GF+P VA F+
Sbjct: 143 DHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFS 202

Query: 138 ELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
            ++   CKRGR+ +A EVF+ M  VGCEPTI TYN L+ GLCYVGR
Sbjct: 203 AVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGR 248



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 303 LELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQ-PNVAIFTELIN 127
           +E++  + +   EP   TY+ LI   C      EA   LN++ ++  Q P++  FT +++
Sbjct: 218 MEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLKESPKQTPDIYTFTIVLD 277

Query: 126 SFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVG 4
            FCK GR  +A  +F    R G  PTI TYN LL G C  G
Sbjct: 278 GFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEG 318


>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
           gi|108708021|gb|ABF95816.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
           Os03g0336000 [Oryza sativa Japonica Group]
           gi|125543773|gb|EAY89912.1| hypothetical protein
           OsI_11461 [Oryza sativa Indica Group]
           gi|215712300|dbj|BAG94427.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 545

 Score =  114 bits (284), Expect = 1e-23
 Identities = 52/106 (49%), Positives = 70/106 (66%)
 Frame = -3

Query: 318 EHQLVLELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQPNVAIFT 139
           +H   + L+ AL    + PD  +Y+  ++C C+K  P EA  AL+EMV  GF+P VA F+
Sbjct: 143 DHDSAVALFRALRPNGVTPDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFS 202

Query: 138 ELINSFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
            ++   CKRGR+ +A EVF+ M  VGCEPTI TYN L+ GLCYVGR
Sbjct: 203 AVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGR 248



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
 Frame = -3

Query: 303 LELYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQ-PNVAIFTELIN 127
           +E++  + +   EP   TY+ LI   C      EA   LN++ ++  Q P++  FT +++
Sbjct: 218 MEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKLKESPKQTPDIYTFTIVLD 277

Query: 126 SFCKRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVG 4
            FCK GR  +A  +F    R G  PTI TYN LL G C  G
Sbjct: 278 GFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEG 318


>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498638|gb|AES79841.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  110 bits (274), Expect = 2e-22
 Identities = 52/99 (52%), Positives = 71/99 (71%)
 Frame = -3

Query: 297 LYSALSSFVLEPDCGTYSLLIRCYCKKDDPCEANRALNEMVKNGFQPNVAIFTELINSFC 118
           +++ LSSF L PD  TYS++IRC+C K++  EA R L  +++NGF+P+ A  T LINS C
Sbjct: 133 MFTKLSSFHLVPDSCTYSIMIRCHCSKNELEEAKRVLFTVLENGFEPDSATITVLINSLC 192

Query: 117 KRGRMHKAFEVFEVMGRVGCEPTINTYNCLLKGLCYVGR 1
           KRG++ KA EVFE + R G +  +  YNCLL+GL YVGR
Sbjct: 193 KRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGR 231


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