BLASTX nr result

ID: Panax21_contig00034414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034414
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77973.1| hypothetical protein VITISV_006174 [Vitis vinifera]    57   2e-06
emb|CAJ44366.1| putative CC-NBS-LRR resistance protein [Malus x ...    55   5e-06
emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]    55   5e-06

>emb|CAN77973.1| hypothetical protein VITISV_006174 [Vitis vinifera]
          Length = 991

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
 Frame = -2

Query: 483 ITIDECRKCQQLPSFGQLPFLKVLDLRNLSSIDFIHNSTTEXXXXXXXXXXXXLARGSRD 304
           I +  C +C+ LP  G LP LK L+L +LS+++++  S++E                   
Sbjct: 593 IEMRNCEQCKVLPPLGLLPHLKYLELEDLSALEYMQESSSE------------------- 633

Query: 303 NLVGGMRIQSFFPSXXXXXXXXXXXXXEWRREVAMDDDNIDFSTHFLSFPHLSTLYIVRC 124
                    SFFP+              W ++V  + D        LSF HLS L I  C
Sbjct: 634 --------MSFFPALEILRLYKLRNVKGWLKDVTAEQD--------LSFLHLSELIISCC 677

Query: 123 ASLTSIPLH--PCLKQLQITY 67
            +L S+PLH  P L Q  + +
Sbjct: 678 HNLISLPLHSSPFLSQFDMNH 698


>emb|CAJ44366.1| putative CC-NBS-LRR resistance protein [Malus x domestica]
          Length = 955

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 50/155 (32%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
 Frame = -2

Query: 468  CRKCQQLPSFGQLPFLKVLDLRNLSSIDFIHNSTTEXXXXXXXXXXXXLARGSRDNLVGG 289
            C +CQ LP    LP LK L L  L ++++I  S  E                S +++   
Sbjct: 803  CNRCQHLPPLDLLPSLKSLHLSCLGNLEYILISEKE----------------SSNSMSDE 846

Query: 288  MRIQSFFPSXXXXXXXXXXXXXEWRREVAMDDDNIDFSTHFLS---FPHLSTLYIVRCAS 118
            M   SFFPS              W R    +  +   ST  LS   FP LSTL I+ C +
Sbjct: 847  MMRISFFPSLETLEVYICPVLKGWWRAHTHNSASSSSSTENLSLPSFPSLSTLSIMDCPN 906

Query: 117  LTSIPLH----PCLKQLQITYTCEKLLQSMTKRKG 25
            LTS+P      PCLK L I+  C  L +   K  G
Sbjct: 907  LTSLPEGTRGLPCLKTLYIS-GCPMLGERCKKETG 940


>emb|CAN67734.1| hypothetical protein VITISV_017638 [Vitis vinifera]
          Length = 1211

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
 Frame = -2

Query: 483  ITIDECRKCQQLPSFGQLPFLKVLDLRNLSSIDFIHNSTTEXXXXXXXXXXXXLARGSRD 304
            I I  C +CQ LP FGQLP L++L L++L+++ +I+ S++                    
Sbjct: 786  IEIRRCDRCQDLPPFGQLPSLELLKLQDLTAVVYINESSS-------------------- 825

Query: 303  NLVGGMRIQSFFPSXXXXXXXXXXXXXEWRREVAMDDDNIDFSTHFLSFPHLSTLYIVRC 124
                      FFPS              W R    ++  +  S H  SFP LS   I+ C
Sbjct: 826  ------ATDPFFPSLKRLELYELPNLKGWWRRDGTEEQVL--SVH--SFPCLSEFLIMGC 875

Query: 123  ASLTS--IPLHPCLKQLQITY 67
             +LTS  +P  PC  QL++ +
Sbjct: 876  HNLTSLQLPPSPCFSQLELEH 896


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