BLASTX nr result

ID: Panax21_contig00034413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034413
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632371.1| PREDICTED: uncharacterized protein LOC100246...    70   2e-10
ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|1...    68   7e-10
ref|XP_002531872.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>ref|XP_003632371.1| PREDICTED: uncharacterized protein LOC100246955 [Vitis vinifera]
          Length = 72

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = -3

Query: 358 MKPQHHLSGDTHEPKMTIGEKLRHAYTTAMVAV--NGRGRGNTISVSKEIERRNRRSGVE 185
           MKP H L GD   P+ T+GE+LR AY  A++AV  N   +G  + + KEIERR   S  +
Sbjct: 1   MKPTH-LPGDG--PQTTVGERLRLAYEAAVMAVARNWAVKGGGVPIPKEIERRKHCSAAD 57

Query: 184 DPLRRIMFLGSWSHT 140
           DP+R +MFLGSW+HT
Sbjct: 58  DPIRTMMFLGSWNHT 72


>ref|XP_002320633.1| predicted protein [Populus trichocarpa] gi|118484370|gb|ABK94062.1|
           unknown [Populus trichocarpa]
           gi|222861406|gb|EEE98948.1| predicted protein [Populus
           trichocarpa]
          Length = 80

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 8/81 (9%)
 Frame = -3

Query: 358 MKPQHHLSGDTHEP---KMTIGEKLRHAYTTAMVAV----NGRGRGNT-ISVSKEIERRN 203
           MKP H+LS D   P   K TI E+L+ A   A V++    NG G GN+ +  SKEIERRN
Sbjct: 1   MKP-HNLSSDGSLPRDAKRTIAERLKQAIDAATVSMTMARNGAGEGNSALLYSKEIERRN 59

Query: 202 RRSGVEDPLRRIMFLGSWSHT 140
             S  EDP+R +MFLGSW HT
Sbjct: 60  WSSQAEDPIRTMMFLGSWGHT 80


>ref|XP_002531872.1| conserved hypothetical protein [Ricinus communis]
           gi|223528480|gb|EEF30509.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/91 (47%), Positives = 50/91 (54%), Gaps = 18/91 (19%)
 Frame = -3

Query: 358 MKPQHH--LSGDT----HEPKMTIGEKLRHAYTTAMVAVNGRGRGNTISVS--------- 224
           MKP  H  LS D     HE K T GEKL+ AY +A    NG G+GNT + S         
Sbjct: 1   MKPHSHGCLSTDGSLTHHESKRTFGEKLKQAYESAR---NGVGKGNTTTASTASTANSLW 57

Query: 223 --KEIERRNRRSG-VEDPLRRIMFLGSWSHT 140
             KE ERRN  +   EDP+R +MFLGSW HT
Sbjct: 58  FSKENERRNWTTYCAEDPIRTMMFLGSWGHT 88


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