BLASTX nr result

ID: Panax21_contig00034405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034405
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264214.1| PREDICTED: uncharacterized protein LOC100262...   100   1e-19
ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ri...    79   5e-13
ref|XP_002319036.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|NP_198085.1| Prefoldin chaperone subunit family protein [Ara...    73   3e-11

>ref|XP_002264214.1| PREDICTED: uncharacterized protein LOC100262311 [Vitis vinifera]
           gi|298205014|emb|CBI34321.3| unnamed protein product
           [Vitis vinifera]
          Length = 613

 Score =  100 bits (249), Expect = 1e-19
 Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2   IEQKKELKSHYTVLKQDLASVENKLTDSRNELDNMKAKVGLAEANSEIILNMLRNTATLV 181
           I +KKEL+S Y +LK + AS E  L +++  +D+M+ KV    ANSE+ L ML+NT  LV
Sbjct: 463 IGEKKELQSLYEMLKGEKASAEKNLVEAQQGIDDMRGKVESMLANSELALAMLKNTGALV 522

Query: 182 SQSTNES-----EMVDQMEAGEEIKAYLTELESIKNAFKSRESIVEDMKRQLESLQH--S 340
             S +E+     E V +    EE + +  +LE IKNAF+SRE+ VEDMKRQ+E+LQ   +
Sbjct: 523 CPSKDENNGKQEEGVYEQNTKEETQPFAAQLEVIKNAFRSRETEVEDMKRQVETLQKTLA 582

Query: 341 EAAHKKXXXXXXXXXXXXXXXXXVAYVARGH 433
           EA  K+                  AYVA+GH
Sbjct: 583 EAHKKRNFWTLVSSATTIFAAASFAYVAKGH 613


>ref|XP_002328537.1| predicted protein [Populus trichocarpa] gi|222838252|gb|EEE76617.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   IEQKKELKSHYTVLKQDLASVENKLTDSRNELDNMKAKVGLAEANSEIILNMLRNTATLV 181
           + QKKE++S    L+++   ++   T++  ++D ++ K+  A  N +  L ML+NTA L+
Sbjct: 478 VSQKKEMESQVATLEKEKDLLQKHFTEAERKIDELRTKIESAGTNYDRALAMLKNTAALL 537

Query: 182 SQSTNESE--MVDQMEAGEEIKAYLTELESIKNAFKSRESIVEDMKRQLESLQHSEAAHK 355
            +S N  E  +V +     EI+ Y ++LE IK AF +++++VE+MK+QLE LQ+S A   
Sbjct: 538 CESNNVKEDMIVTEKMLNGEIEPYASKLEVIKTAFSNKQTVVEEMKQQLEFLQNSVAKAD 597

Query: 356 K 358
           K
Sbjct: 598 K 598


>ref|XP_002512311.1| Ubiquitin-protein ligase BRE1A, putative [Ricinus communis]
           gi|223548272|gb|EEF49763.1| Ubiquitin-protein ligase
           BRE1A, putative [Ricinus communis]
          Length = 622

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/121 (34%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
 Frame = +2

Query: 2   IEQKKELKSHYTVLKQDLASVENKLTDSRNELDNMKAKVGLAEANSEIILNMLRNTATLV 181
           +E KKE++   + L ++   ++    D+  E+D ++ K+     NS+  L ML+ T   V
Sbjct: 475 LELKKEMEGQVSSLMKEKDMMQKNFLDAEREIDALRTKLESVGINSDRALAMLKKTVAFV 534

Query: 182 SQSTN--ESEMVDQMEAGEEIKAYLTELESIKNAFKSRESIVEDMKRQLESLQHSEAAHK 355
             S +  E   + + +   EI+ ++ ELE IKNAF++RE++VE+MK+Q+E LQ+SEA  +
Sbjct: 535 CPSNDGKEKASITEKKLDGEIEPFVAELEIIKNAFRNRETVVEEMKQQVEFLQNSEAEAQ 594

Query: 356 K 358
           K
Sbjct: 595 K 595


>ref|XP_002319036.1| predicted protein [Populus trichocarpa] gi|222857412|gb|EEE94959.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/120 (35%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
 Frame = +2

Query: 5   EQKKELKSHYTVLKQDLASVENKLTDSRNELDNMKAKVGLAEANSEIILNMLRNTATLVS 184
           +QKKE+++  ++L+++   V+  LT++  ++ +++ K+  A   S+  L ML++T  L+ 
Sbjct: 180 KQKKEMETQVSLLEKEKDLVQKHLTEAEGKIIDLRNKMESAGTISDRALTMLKSTVALLC 239

Query: 185 QSTNESE--MVDQMEAGEEIKAYLTELESIKNAFKSRESIVEDMKRQLESLQHSEAAHKK 358
           +S N  E   V +     EI+ Y +ELE IK AF+++E++VEDMK+Q+E L+ S A  KK
Sbjct: 240 ESNNGKEEMTVTEKMLDSEIEPYASELEVIKTAFRNKETMVEDMKQQVEYLRDSVARAKK 299


>ref|NP_198085.1| Prefoldin chaperone subunit family protein [Arabidopsis thaliana]
           gi|332006290|gb|AED93673.1| Prefoldin chaperone subunit
           family protein [Arabidopsis thaliana]
          Length = 628

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/120 (33%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   IEQKKELKSHYTVLKQDLASVENKLTDSRNELDNMKAKVGLAEANSEIILNMLRNTATLV 181
           I++KKEL++    L+ + A ++  + + +     +K ++  A  N++  L ML++ ++LV
Sbjct: 486 IKEKKELENRSESLRNEKAILQKDIVELKRATGVLKTELESAGTNAKQSLTMLKSVSSLV 545

Query: 182 SQSTNESEMVDQMEAGEEIKAYLTELESIKNAFKSRESIVEDMKRQLESLQHS-EAAHKK 358
               N+    D+ + G+ + +Y  +LE+IK AFK++ES+VE+MK++L  ++HS E AHKK
Sbjct: 546 CGIENKK---DEKKRGKGMDSYSVQLEAIKKAFKNKESMVEEMKKELAKMKHSVEDAHKK 602


Top