BLASTX nr result

ID: Panax21_contig00034404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034404
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281291.2| PREDICTED: two-component response regulator ...   106   2e-21
ref|XP_002533196.1| two-component sensor histidine kinase bacter...    91   7e-17
emb|CBM42560.1| putative B-type response regulator 15 [Populus x...    86   2e-15
ref|XP_002315852.1| type-b response regulator [Populus trichocar...    80   1e-13
emb|CBM42561.1| putative B-type response regulator 16 [Populus x...    75   4e-12

>ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
           vinifera]
          Length = 643

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/121 (51%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
 Frame = +1

Query: 4   SASFQAGNSSALAIQSCGFNMNSVIDYSLHTPQSNNSSFGVGQMPDGDLKRTGVLNGYXX 183
           SASFQAGNS A   Q+C FN N+VIDYSL TPQSNNSS  VGQ+ DGDLK T VL G+  
Sbjct: 465 SASFQAGNSPASVNQNCSFNRNAVIDYSLLTPQSNNSSLSVGQISDGDLKNTTVLGGFSA 524

Query: 184 XXXXXXXXXXXXXXXEAGAGGRVQNSAATFSATRQLAGA----NDIKGSYNEKSSQVLDY 351
                                 VQNS  TF A RQL G      DI+GSY  +S +VLD 
Sbjct: 525 PGSISPSVSSCSVNAGNSTTRPVQNSTVTFGAPRQLPGVVSNICDIQGSYGARSGEVLDQ 584

Query: 352 G 354
           G
Sbjct: 585 G 585


>ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
           communis] gi|223526994|gb|EEF29188.1| two-component
           sensor histidine kinase bacteria, putative [Ricinus
           communis]
          Length = 669

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 53/121 (43%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 4   SASFQAGNSSALAIQSCGFNMNSVIDYSLHTPQSNNSSFGVGQMPDGDLKRTGVLNGYXX 183
           SA FQAGNS A   QS  FN N VIDYSL + QSNNS+  +G +P+GDLK TG +NGY  
Sbjct: 472 SACFQAGNSPASVNQS-NFNRNVVIDYSLLSSQSNNSALNIGHIPEGDLKTTGAVNGYSA 530

Query: 184 XXXXXXXXXXXXXXXEAGAGGRVQNSAATFSATRQLAGAN----DIKGSYNEKSSQVLDY 351
                          ++G   +VQN    F A RQL   +    +I+GSY  +S  +LD 
Sbjct: 531 PGSLSPPASSCSVNADSGVPRQVQNPTLAFGAVRQLPALSPNIFNIQGSYGVRSDDILDQ 590

Query: 352 G 354
           G
Sbjct: 591 G 591


>emb|CBM42560.1| putative B-type response regulator 15 [Populus x canadensis]
          Length = 671

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/121 (43%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
 Frame = +1

Query: 4   SASFQAGNSSALAIQSCGFNMNSVIDYSLHTPQSNNSSFGVGQMPDGDLKRTGVLNGYXX 183
           SA+FQAGNS A   Q+C ++ + +IDYSL +PQSNNSS  +GQ+  GDLK TGV +GY  
Sbjct: 466 SATFQAGNSPASVNQNCSYSRSPMIDYSLLSPQSNNSSLNIGQISHGDLKTTGV-SGYSG 524

Query: 184 XXXXXXXXXXXXXXXEAGAGGRVQNSAATFSATRQLAG----ANDIKGSYNEKSSQVLDY 351
                               G  Q+S  T  A RQL G     ++ +GSY  KSS+VLD 
Sbjct: 525 SGSISPLSSCSVNPDNTSQQG--QSSTMTIRAARQLPGLGPNISNFQGSYGAKSSEVLDQ 582

Query: 352 G 354
           G
Sbjct: 583 G 583


>ref|XP_002315852.1| type-b response regulator [Populus trichocarpa]
           gi|222864892|gb|EEF02023.1| type-b response regulator
           [Populus trichocarpa]
          Length = 663

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 4/118 (3%)
 Frame = +1

Query: 7   ASFQAGNSSALAIQSCGFNMNSVIDYSLHTPQSNNSSFGVGQMPDGDLKRTGVLNGYXXX 186
           A+FQAGNS A   Q+C +N +++IDYSL + QSNNSS  +GQ+ +GDLK TGV +GY   
Sbjct: 468 ATFQAGNSPASVDQNCSYNRSTMIDYSLLSAQSNNSSLNIGQILNGDLKTTGV-SGYSGS 526

Query: 187 XXXXXXXXXXXXXXEAGAGGRVQNSAATFSATRQLAG----ANDIKGSYNEKSSQVLD 348
                              GR  +S     A RQL G     ++++GSY+ +SS+VLD
Sbjct: 527 VSISPLSPCSVDPDNTSQQGR--SSTMAIRAVRQLPGLVPNISNLQGSYSARSSEVLD 582


>emb|CBM42561.1| putative B-type response regulator 16 [Populus x canadensis]
          Length = 663

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
 Frame = +1

Query: 7   ASFQAGNSSALAIQSCGFNMNSVIDYSLHTPQSNNSSFGVGQMPDGDLKRTGVLNGYXXX 186
           A+FQAGNS A   QSC +N +++IDYSL + QSNNS   +GQ+ +GDLK TGV + Y   
Sbjct: 468 ATFQAGNSPASVDQSCSYNRSTMIDYSLLSAQSNNSLLNIGQILNGDLKTTGV-SRYSGS 526

Query: 187 XXXXXXXXXXXXXXEAGAGGRVQNSAATFSATRQLAG----ANDIKGSYNEKSSQVLD 348
                              GR  +S     A RQL G     ++ +GSY+ +SS+VLD
Sbjct: 527 VSISPLSPCSVDPDNTSQQGR--SSTMAIRAVRQLPGLVPNISNFQGSYSARSSEVLD 582


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