BLASTX nr result
ID: Panax21_contig00034385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00034385
(605 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containi... 340 9e-92
emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera] 340 9e-92
ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containi... 314 7e-84
ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containi... 311 6e-83
ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|2... 298 4e-79
>ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
[Vitis vinifera]
Length = 719
Score = 340 bits (873), Expect = 9e-92
Identities = 163/201 (81%), Positives = 179/201 (89%)
Frame = -1
Query: 605 LLGRAGKLNEAEKLIESMPYNPGSIGWGSLLGACRTHGNIELAVKAANQCLQQEPSNAAP 426
LLGRAGKL+EAE LI MP+NPGSIGW SLLGACRTHGNIELAVKAANQ LQ EPSNAAP
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 425 YVILANMYAHAGRWEEMASVRKLMRDNGVKKKPGCSWIEMNNLVHVFVAEDSSHPLIKEI 246
YV+L+NMYA AGRWEE+A+VRK MRD GVKKKPGCSWIE+ +HVFVAEDSSHP+IKEI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609
Query: 245 YVFWEKMLNKMRQAGYVPDVRWTLVKDDGQMEGEKEMRLRYHSEKLAVAFGLLSTKDGEP 66
Y F E+M KM++AGYVPDVRW LVKDDG GEKE+RL +HSEKLAVAFGL+STKDGEP
Sbjct: 610 YEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEP 669
Query: 65 ILVVKNLRICGDCHNAIKLIS 3
+LVVKNLRICGDCHNAIK IS
Sbjct: 670 VLVVKNLRICGDCHNAIKFIS 690
>emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 340 bits (873), Expect = 9e-92
Identities = 163/201 (81%), Positives = 179/201 (89%)
Frame = -1
Query: 605 LLGRAGKLNEAEKLIESMPYNPGSIGWGSLLGACRTHGNIELAVKAANQCLQQEPSNAAP 426
LLGRAGKL+EAE LI MP+NPGSIGW SLLGACRTHGNIELAVKAANQ LQ EPSNAAP
Sbjct: 490 LLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 425 YVILANMYAHAGRWEEMASVRKLMRDNGVKKKPGCSWIEMNNLVHVFVAEDSSHPLIKEI 246
YV+L+NMYA AGRWEE+A+VRK MRD GVKKKPGCSWIE+ +HVFVAEDSSHP+IKEI
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEI 609
Query: 245 YVFWEKMLNKMRQAGYVPDVRWTLVKDDGQMEGEKEMRLRYHSEKLAVAFGLLSTKDGEP 66
Y F E+M KM++AGYVPDVRW LVKDDG GEKE+RL +HSEKLAVAFGL+STKDGEP
Sbjct: 610 YEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRLGHHSEKLAVAFGLISTKDGEP 669
Query: 65 ILVVKNLRICGDCHNAIKLIS 3
+LVVKNLRICGDCHNAIK IS
Sbjct: 670 VLVVKNLRICGDCHNAIKFIS 690
>ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
[Glycine max]
Length = 722
Score = 314 bits (805), Expect = 7e-84
Identities = 148/201 (73%), Positives = 176/201 (87%)
Frame = -1
Query: 605 LLGRAGKLNEAEKLIESMPYNPGSIGWGSLLGACRTHGNIELAVKAANQCLQQEPSNAAP 426
LLGRAGKL EAE++IE+MP+NPGSI W +LLGACR HGN+ELAVKAAN+ L+ EP NAAP
Sbjct: 493 LLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAP 552
Query: 425 YVILANMYAHAGRWEEMASVRKLMRDNGVKKKPGCSWIEMNNLVHVFVAEDSSHPLIKEI 246
YV+L+NMYA A RWEE A+V++LMR+ GVKKKPGCSWIE++ VHVFVAED+SHP+IKEI
Sbjct: 553 YVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612
Query: 245 YVFWEKMLNKMRQAGYVPDVRWTLVKDDGQMEGEKEMRLRYHSEKLAVAFGLLSTKDGEP 66
+V+ KML KM+QAGYVPD+RW LVKD+ E+E RL YHSEKLAVAFGL+ST++G P
Sbjct: 613 HVYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVP 672
Query: 65 ILVVKNLRICGDCHNAIKLIS 3
ILVVKNLRICGDCHNA+KLIS
Sbjct: 673 ILVVKNLRICGDCHNAVKLIS 693
>ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49710-like
[Glycine max]
Length = 722
Score = 311 bits (797), Expect = 6e-83
Identities = 148/201 (73%), Positives = 175/201 (87%)
Frame = -1
Query: 605 LLGRAGKLNEAEKLIESMPYNPGSIGWGSLLGACRTHGNIELAVKAANQCLQQEPSNAAP 426
LLGRAGKL EAE++IE+MP+NPGSI W +LLGACR HGN+ELAVKAAN+ LQ EP NAAP
Sbjct: 493 LLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAP 552
Query: 425 YVILANMYAHAGRWEEMASVRKLMRDNGVKKKPGCSWIEMNNLVHVFVAEDSSHPLIKEI 246
YV+L+NMYA A RWEE A+V++LMR+ GVKKKPGCSWIE++ VHVFVAED+SHP+IKEI
Sbjct: 553 YVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEI 612
Query: 245 YVFWEKMLNKMRQAGYVPDVRWTLVKDDGQMEGEKEMRLRYHSEKLAVAFGLLSTKDGEP 66
+V+ ++L KM+QAGYVPD+RW LVKD+ EKE RL YHSEKLAVAFGL+ST++ P
Sbjct: 613 HVYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVP 672
Query: 65 ILVVKNLRICGDCHNAIKLIS 3
ILVVKNLRICGDCHNAIKLIS
Sbjct: 673 ILVVKNLRICGDCHNAIKLIS 693
>ref|XP_002320672.1| predicted protein [Populus trichocarpa] gi|222861445|gb|EEE98987.1|
predicted protein [Populus trichocarpa]
Length = 720
Score = 298 bits (764), Expect = 4e-79
Identities = 140/201 (69%), Positives = 171/201 (85%)
Frame = -1
Query: 605 LLGRAGKLNEAEKLIESMPYNPGSIGWGSLLGACRTHGNIELAVKAANQCLQQEPSNAAP 426
LLGRAGKL+EAE+LI++MP++PGS W +LLGACR +GN+ELA KAANQ LQ EP+NA P
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550
Query: 425 YVILANMYAHAGRWEEMASVRKLMRDNGVKKKPGCSWIEMNNLVHVFVAEDSSHPLIKEI 246
Y++LA+MY+ A +WEE A +RKLMRD G++KKPGCSWIE+N VHVFVAED+SHP IKEI
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEI 610
Query: 245 YVFWEKMLNKMRQAGYVPDVRWTLVKDDGQMEGEKEMRLRYHSEKLAVAFGLLSTKDGEP 66
+++ ++M KM++AGYVPDVRW VKDD E EKE+ L +HSEKLAVAFGLL TK GEP
Sbjct: 611 HMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEP 670
Query: 65 ILVVKNLRICGDCHNAIKLIS 3
+LVVKNLRICGDCHNAIK +S
Sbjct: 671 LLVVKNLRICGDCHNAIKFMS 691