BLASTX nr result

ID: Panax21_contig00034374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034374
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143816.1| PREDICTED: probable ADP-ribosylation factor ...    63   3e-08
ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arab...    61   8e-08
emb|CBI40178.3| unnamed protein product [Vitis vinifera]               61   8e-08
ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activat...    60   1e-07
ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor ...    60   2e-07

>ref|XP_004143816.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Cucumis sativus]
          Length = 416

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 17/78 (21%)
 Frame = +1

Query: 301 EQNMDPTTNSGPCLYDLL------------RLDPNYKTRNASFQQS-----PQDRLKNLL 429
           +QN D    SG CL+DLL            R+  + +T+  ++++      PQ RL++LL
Sbjct: 5   QQNSDSNGVSGACLFDLLFPDSEMQGWDWSRMPSDSETQRWNWKKDQRLSGPQKRLEDLL 64

Query: 430 SESGNKFCADCGSPDPKW 483
            +SGN FCADCGSPDPKW
Sbjct: 65  QQSGNMFCADCGSPDPKW 82


>ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arabidopsis lyrata subsp.
           lyrata] gi|297328399|gb|EFH58818.1| hypothetical protein
           ARALYDRAFT_478135 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
 Frame = +1

Query: 301 EQNMDPTTNSGP--CLYDLLRLDPNYKTRNASFQQS---PQDRLKNLLSESGNKFCADCG 465
           ++N++P   SG   CLY+LL  +    T     Q S   P+DRL+ LL + GNK+CADCG
Sbjct: 5   QENVEPVEVSGSHACLYELLCSETPKWTPLKDLQTSSSDPRDRLEKLLKQPGNKYCADCG 64

Query: 466 SPDPKW 483
           SP+PKW
Sbjct: 65  SPEPKW 70


>emb|CBI40178.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/71 (47%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
 Frame = +1

Query: 289 GLKCEQNMDPT-----TNSGPCLYDLLRLDPNYKTRNASFQQS-PQDRLKNLLSESGNKF 450
           GLK     D T     + +G  L DLLR D  +  R      S P+ RL+NLL +SGN  
Sbjct: 36  GLKMPTRQDNTDSNNGSGTGSSLLDLLRSDIYWNCRKEGQTSSGPRGRLENLLCQSGNNI 95

Query: 451 CADCGSPDPKW 483
           CADCGSPDPKW
Sbjct: 96  CADCGSPDPKW 106


>ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activating protein AGD11
           [Arabidopsis thaliana]
           gi|75154127|sp|Q8L7A4.1|AGD11_ARATH RecName:
           Full=Probable ADP-ribosylation factor GTPase-activating
           protein AGD11; Short=ARF GAP AGD11; AltName:
           Full=Protein ARF-GAP DOMAIN 11; Short=AtAGD11
           gi|22531086|gb|AAM97047.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|25083805|gb|AAN72120.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|332641102|gb|AEE74623.1| putative ADP-ribosylation
           factor GTPase-activating protein AGD11 [Arabidopsis
           thaliana]
          Length = 385

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = +1

Query: 301 EQNMDPTTNSGP--CLYDLLRLDPNYKT--RNASFQQS---PQDRLKNLLSESGNKFCAD 459
           ++N+DP   SG   CLY+LL  +    T  R    Q S   P+DRL+ LL + GNK+CAD
Sbjct: 5   QENVDPVEVSGSHACLYELLCSETPKWTPLRVEDLQTSSSDPRDRLEKLLKQPGNKYCAD 64

Query: 460 CGSPDPKW 483
           CGSP+PKW
Sbjct: 65  CGSPEPKW 72


>ref|XP_002270290.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Vitis vinifera]
          Length = 376

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/64 (50%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +1

Query: 301 EQNMDPTTNSGP--CLYDLLRLDPNYKTRNASFQQS-PQDRLKNLLSESGNKFCADCGSP 471
           + N D    SG    L DLLR D  +  R      S P+ RL+NLL +SGN  CADCGSP
Sbjct: 5   QDNTDSNNGSGTGSSLLDLLRSDIYWNCRKEGQTSSGPRGRLENLLCQSGNNICADCGSP 64

Query: 472 DPKW 483
           DPKW
Sbjct: 65  DPKW 68


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