BLASTX nr result

ID: Panax21_contig00034373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034373
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]   152   2e-35
gb|ABD78322.1| polyprotein [Primula vulgaris]                         151   6e-35
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]        151   6e-35
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   150   1e-34
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   149   2e-34

>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/150 (51%), Positives = 104/150 (69%)
 Frame = -1

Query: 452  REFLGLTTYYKKII*NYGTMAKPLTSLLQKDNFGWKEEAEKAFDRLKKTLTITPVLALPD 273
            R FLGLT YY++ + +YG +AKPLT LL+KD F W E + +AF  LK+ +   PVLALP+
Sbjct: 743  RGFLGLTGYYRRFVKDYGKIAKPLTDLLKKDAFHWTEGSNQAFMALKQAMITAPVLALPN 802

Query: 272  FNKQFEIGTYATGIGIRAILMQEGRPLAFFSKVFGPNGRGFSTYEKEHIAVVEAVKRWSS 93
            F+K+F I T A+G GI A+LMQEG P+A+ SK      +  STYEKE +A++ A+K+W S
Sbjct: 803  FSKEFIIETDASGQGIGAVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWES 862

Query: 92   YLGLKQFLTKIDHQSLKCFL*QKVVSCLQQ 3
            YL  + F+ K DHQSLK  L Q+V +  QQ
Sbjct: 863  YLVDRHFVIKTDHQSLKYLLEQRVTTPTQQ 892


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score =  151 bits (381), Expect = 6e-35
 Identities = 79/150 (52%), Positives = 101/150 (67%)
 Frame = -1

Query: 452  REFLGLTTYYKKII*NYGTMAKPLTSLLQKDNFGWKEEAEKAFDRLKKTLTITPVLALPD 273
            R FLGLT YY++ I NYG +A+ LT LL+KD F W  EAE AF+ LKK +T  PVLALPD
Sbjct: 719  RGFLGLTGYYRRFIRNYGGIARALTELLKKDAFLWSREAEIAFNNLKKAVTSPPVLALPD 778

Query: 272  FNKQFEIGTYATGIGIRAILMQEGRPLAFFSKVFGPNGRGFSTYEKEHIAVVEAVKRWSS 93
            FNK F I   A+G G+ A+L QE RP+AFFSK         STYEKE  A+V+A+++W  
Sbjct: 779  FNKTFTIECDASGQGVGAVLQQEKRPIAFFSKALKGRLLTLSTYEKELYALVQAIQKWRP 838

Query: 92   YLGLKQFLTKIDHQSLKCFL*QKVVSCLQQ 3
            Y+  ++F+   DHQSLK  L QK+ +  QQ
Sbjct: 839  YICCQEFIVNTDHQSLKYLLEQKISTPSQQ 868


>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
          Length = 1373

 Score =  151 bits (381), Expect = 6e-35
 Identities = 76/149 (51%), Positives = 100/149 (67%)
 Frame = -1

Query: 452  REFLGLTTYYKKII*NYGTMAKPLTSLLQKDNFGWKEEAEKAFDRLKKTLTITPVLALPD 273
            R FL LT YY++ +  YG + +PL  LL+KDNF W  E +KAFD+LKK +T  PVLALPD
Sbjct: 826  RGFLRLTGYYRRFVQGYGAICRPLHDLLKKDNFHWGPEQQKAFDQLKKIMTTCPVLALPD 885

Query: 272  FNKQFEIGTYATGIGIRAILMQEGRPLAFFSKVFGPNGRGFSTYEKEHIAVVEAVKRWSS 93
            F+K F + T A G  I A+L+QEGRP+A++SK  G    G STYEKE IA++EA+K+W  
Sbjct: 886  FSKPFVLETDACGSSIGAVLIQEGRPIAYYSKALGQRAAGSSTYEKEAIAILEALKKWRH 945

Query: 92   YLGLKQFLTKIDHQSLKCFL*QKVVSCLQ 6
            YL   Q + +ID QSLK     K+   +Q
Sbjct: 946  YLLGNQVIIRIDQQSLKYMATHKLSEGIQ 974


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  150 bits (379), Expect = 1e-34
 Identities = 79/150 (52%), Positives = 104/150 (69%)
 Frame = -1

Query: 452  REFLGLTTYYKKII*NYGTMAKPLTSLLQKDNFGWKEEAEKAFDRLKKTLTITPVLALPD 273
            R FLGLT YY+K I +YG +AKPLT L +KD F W E+ + AFD+LK+ LT +PVLALPD
Sbjct: 613  RGFLGLTDYYRKFIKDYGKIAKPLTELTKKDAFMWNEKTQDAFDQLKRRLTTSPVLALPD 672

Query: 272  FNKQFEIGTYATGIGIRAILMQEGRPLAFFSKVFGPNGRGFSTYEKEHIAVVEAVKRWSS 93
            FNK+F I   A+G GI AILMQ+ +P+A++SK  G      S YEKE +AVV A++ W  
Sbjct: 673  FNKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKSAYEKELMAVVLAIQHWRP 732

Query: 92   YLGLKQFLTKIDHQSLKCFL*QKVVSCLQQ 3
            YL  ++F+   D +SLK  L Q+VV+  QQ
Sbjct: 733  YLLGRRFVVSTDQKSLKQLLQQRVVTAEQQ 762


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  149 bits (376), Expect = 2e-34
 Identities = 75/150 (50%), Positives = 102/150 (68%)
 Frame = -1

Query: 452  REFLGLTTYYKKII*NYGTMAKPLTSLLQKDNFGWKEEAEKAFDRLKKTLTITPVLALPD 273
            R FLGLT YY++ + +YG +AKPLT LL+KD F W E + +AF  LK+ +   PVL LP+
Sbjct: 750  RGFLGLTGYYRRFVKDYGKIAKPLTDLLKKDAFHWTEGSNQAFMALKQAMITAPVLXLPN 809

Query: 272  FNKQFEIGTYATGIGIRAILMQEGRPLAFFSKVFGPNGRGFSTYEKEHIAVVEAVKRWSS 93
            F+K+F I T A+G GI  +LMQEG P+A+ SK      +  STYEKE +A++ A+K+W S
Sbjct: 810  FSKEFIIETDASGQGIGVVLMQEGHPIAYISKALSDRFQTLSTYEKEMLAILMAIKKWES 869

Query: 92   YLGLKQFLTKIDHQSLKCFL*QKVVSCLQQ 3
            YL  + F+ K DHQSLK  L Q+V +  QQ
Sbjct: 870  YLVDRHFVIKTDHQSLKYLLEQRVTTPTQQ 899


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