BLASTX nr result
ID: Panax21_contig00034368
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034368 (444 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|2... 174 5e-42 ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat... 165 4e-39 ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi... 165 4e-39 ref|XP_002512380.1| pentatricopeptide repeat-containing protein,... 164 7e-39 ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263... 161 6e-38 >ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|222857913|gb|EEE95460.1| predicted protein [Populus trichocarpa] Length = 266 Score = 174 bits (442), Expect = 5e-42 Identities = 82/112 (73%), Positives = 94/112 (83%), Gaps = 4/112 (3%) Frame = +1 Query: 121 HCNG----NETLSTSSAYSVLGVSPNCSLIDLKAAFRAKVKEFHPDARRDGEDSDTMIRR 288 HC G + LSTSSAY+VLG+ P CS +KAAFRAKVK+FHPD +DG+ SD MIRR Sbjct: 51 HCLGRAEEDSPLSTSSAYTVLGIKPGCSAAAIKAAFRAKVKQFHPDLNKDGKVSDLMIRR 110 Query: 289 VIQAYEILSNYSKPEIIESECLDPFEKPECEAFDIFINEFLCVGKGCPYSCV 444 VIQAYE+LSN+S+PEIIE ECLDPFE+PECEAFDIF+NE LCVGKGCPYSCV Sbjct: 111 VIQAYEMLSNFSRPEIIERECLDPFEEPECEAFDIFVNEVLCVGKGCPYSCV 162 >ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 833 Score = 165 bits (417), Expect = 4e-39 Identities = 76/107 (71%), Positives = 90/107 (84%), Gaps = 2/107 (1%) Frame = +1 Query: 130 GNETLSTS--SAYSVLGVSPNCSLIDLKAAFRAKVKEFHPDARRDGEDSDTMIRRVIQAY 303 G +TL + +AY +LG+ P CS +LKAAFRAKVK+FHPD R+G DSD+MIRRVIQAY Sbjct: 623 GEDTLLSGPMAAYRLLGLDPTCSESELKAAFRAKVKQFHPDVNRNGNDSDSMIRRVIQAY 682 Query: 304 EILSNYSKPEIIESECLDPFEKPECEAFDIFINEFLCVGKGCPYSCV 444 E+LS+YS+ E IE ECLDPFE PECEAFD+F+NEFLCVGKGCPYSCV Sbjct: 683 EMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCV 729 >ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340-like [Cucumis sativus] Length = 838 Score = 165 bits (417), Expect = 4e-39 Identities = 76/107 (71%), Positives = 90/107 (84%), Gaps = 2/107 (1%) Frame = +1 Query: 130 GNETLSTS--SAYSVLGVSPNCSLIDLKAAFRAKVKEFHPDARRDGEDSDTMIRRVIQAY 303 G +TL + +AY +LG+ P CS +LKAAFRAKVK+FHPD R+G DSD+MIRRVIQAY Sbjct: 628 GEDTLLSGPMAAYRLLGLDPTCSESELKAAFRAKVKQFHPDVNRNGNDSDSMIRRVIQAY 687 Query: 304 EILSNYSKPEIIESECLDPFEKPECEAFDIFINEFLCVGKGCPYSCV 444 E+LS+YS+ E IE ECLDPFE PECEAFD+F+NEFLCVGKGCPYSCV Sbjct: 688 EMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKGCPYSCV 734 >ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 736 Score = 164 bits (415), Expect = 7e-39 Identities = 76/100 (76%), Positives = 86/100 (86%) Frame = +1 Query: 145 STSSAYSVLGVSPNCSLIDLKAAFRAKVKEFHPDARRDGEDSDTMIRRVIQAYEILSNYS 324 S+S+A+ VLGV P CS +LKAAFRAKVK+FHPD RD + DTMIRRVIQAYEILSN+S Sbjct: 533 SSSAAHMVLGVDPGCSAAELKAAFRAKVKQFHPDVNRDRKFPDTMIRRVIQAYEILSNFS 592 Query: 325 KPEIIESECLDPFEKPECEAFDIFINEFLCVGKGCPYSCV 444 + EIIESECLDPF+ PECEAFDIF+NE LC GKGCPYSCV Sbjct: 593 RSEIIESECLDPFDNPECEAFDIFVNEVLCAGKGCPYSCV 632 >ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera] gi|296088328|emb|CBI36773.3| unnamed protein product [Vitis vinifera] Length = 265 Score = 161 bits (407), Expect = 6e-38 Identities = 75/101 (74%), Positives = 87/101 (86%) Frame = +1 Query: 142 LSTSSAYSVLGVSPNCSLIDLKAAFRAKVKEFHPDARRDGEDSDTMIRRVIQAYEILSNY 321 LS SSAY+VLGV P+CS +LKAAFRAKVK+FHPD ++G DSD MIR VIQAYE+LS Sbjct: 61 LSDSSAYAVLGVDPSCSAPELKAAFRAKVKQFHPDVNKEGGDSDKMIRLVIQAYELLSCC 120 Query: 322 SKPEIIESECLDPFEKPECEAFDIFINEFLCVGKGCPYSCV 444 S+ EIIE ECLDPF++PECEAFD+F+NE LCVGKGCPYSCV Sbjct: 121 SRSEIIERECLDPFDEPECEAFDLFVNEVLCVGKGCPYSCV 161