BLASTX nr result

ID: Panax21_contig00034367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034367
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    86   4e-15
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]             83   3e-14
emb|CAN83548.1| hypothetical protein VITISV_035575 [Vitis vinifera]    81   1e-13
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    80   2e-13
gb|ABI34293.1| Integrase core domain containing protein [Solanum...    80   2e-13

>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 2/133 (1%)
 Frame = -3

Query: 411 LAGNSFSLSSVISFICLNVHTNTSKWIIDSGATDHI--TPYXXXXXXXXXLYAKIH*PNG 238
           ++GNSF  +++ S        N   WI+D GAT H+  +P            +K+H PNG
Sbjct: 346 ISGNSFFYNTISS------SKNQFTWILDIGATYHMIYSPLLFDSIVLPKTSSKVHLPNG 399

Query: 237 QTSIISYYGTVHLSSEIVLHNVLCVLSFHYNLISVSKFTKNNHCNILFLSNQCILQDLAL 58
           +T  I + G+V  S +I LHN L V SF+ NL+S S+ TK+N   + FL ++CILQDL+ 
Sbjct: 400 KTVPIIFTGSVKFSPDITLHNALYVPSFNINLVSASRLTKDNSIGLFFLQSKCILQDLSK 459

Query: 57  KREKEIGRQENGL 19
            R       ++GL
Sbjct: 460 WRMIGXAEVQSGL 472


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
 Frame = -3

Query: 366 CLNVHTNTS-KWIIDSGATDHI--TP--YXXXXXXXXXLYAKIH*PNGQTSIISYYGTVH 202
           C  VH ++S +WI+D+GAT+H+  TP             Y K+H PNGQ   I + G   
Sbjct: 118 CSVVHNSSSHRWIVDTGATNHMSSTPDLLHDTQLLPTTEYNKVHLPNGQKIPIVFSGKSR 177

Query: 201 LSSEIVLHNVLCVLSFHYNLISVSKFTKNNHCNILFLSNQCILQDLALKREKEIGRQENG 22
           L+   + H VL +  F YNL+SVS+ TK  HC ++F  + CILQDL   + K  G  ENG
Sbjct: 178 LTLGDISH-VLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQDLHTVKVKGTGSMENG 236

Query: 21  LFIY 10
           L+ +
Sbjct: 237 LYYW 240


>emb|CAN83548.1| hypothetical protein VITISV_035575 [Vitis vinifera]
          Length = 1225

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
 Frame = -3

Query: 351 TNTSKWIIDSGATDHITP-YXXXXXXXXXLYAKIH*PNGQTSIISYYGTVHLSSEIVLHN 175
           ++++KWIIDSGATDH+T  +             I   NG T  I   GTV  +S I L +
Sbjct: 301 SSSNKWIIDSGATDHMTANHKTFSTFRTHSVPSITVANGSTYEIKGSGTVKPTSSITLSS 360

Query: 174 VLCVLSFHYNLISVSKFTKNNHCNILFLSNQCILQDLALKREKEIGRQENGLFI 13
           VL +L+  +NLI VSK TKN +C++ F  + C+ QDL  KR    G   +GL+I
Sbjct: 361 VLNLLNLAFNLIFVSKLTKNLNCSVSFFPDHCVFQDLMTKRTFGKGHVSDGLYI 414


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
 Frame = -3

Query: 363  LNVHTNTSKWIIDSGATDHIT-PYXXXXXXXXXLYAKIH*PNGQTSIISYYGTVHLSSEI 187
            L++  + + WI+DSGATDH+T                +  PNGQ    ++ GTV LSS I
Sbjct: 734  LSLSASLTSWILDSGATDHVTCSLHNLHSHKRINPITVKLPNGQYVHATHSGTVQLSSNI 793

Query: 186  VLHNVLCVLSFHYNLISVSKFTKNNHCNILFLSNQCILQDLALKREKEIGRQENGLF 16
             LH+VL + SF +NLIS+SK   + +C ++F S  C+LQ++    +  I   ++GL+
Sbjct: 794  TLHDVLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAKHGLY 850


>gb|ABI34293.1| Integrase core domain containing protein [Solanum demissum]
          Length = 716

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
 Frame = -3

Query: 342 SKWIIDSGATDHIT--PYXXXXXXXXXLYAKIH*PNGQTSIISYYGTVHLSSEIVLHNVL 169
           + WI+DSGA++HIT                K+  P G+ + IS+ G   LS    L +VL
Sbjct: 192 TSWIVDSGASNHITGSKNLLLHGDTVGNAGKVQLPTGEFAQISHTGNYSLSGGDSLKDVL 251

Query: 168 CVLSFHYNLISVSKFTKNNHCNILFLSNQCILQDLALKREKEIGRQENGLFI 13
           CV SF +NL+SVSK TK+ +  + F   QC+ QDL   + K  GR++NGL+I
Sbjct: 252 CVPSFKFNLMSVSKVTKDMNGCVKFYPEQCVFQDLCTGKVKVTGREKNGLYI 303


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