BLASTX nr result

ID: Panax21_contig00034366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034366
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ...   217   9e-55
emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]   217   9e-55
ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putativ...   213   1e-53
ref|XP_002324941.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_004173938.1| PREDICTED: probable cyclic nucleotide-gated ...   205   3e-51

>ref|XP_002272241.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Vitis
           vinifera]
          Length = 726

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/133 (83%), Positives = 118/133 (88%), Gaps = 3/133 (2%)
 Frame = -3

Query: 392 TLNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 213
           T NLPSSTRTVRAL EVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYS+HWRTWAACF
Sbjct: 566 TQNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACF 625

Query: 212 IQAAWRRYKRRLMAKNLSMRESFSFPTDDQMS---DETEQEEGEKSIGANSSQAKQNLGV 42
           IQAAWRRYK+R+MAKNLSMRESFSF  DD  +   DETEQE+   S  +NSSQAKQ+LGV
Sbjct: 626 IQAAWRRYKKRIMAKNLSMRESFSFADDDDHADDEDETEQEDEGSSTKSNSSQAKQHLGV 685

Query: 41  TILASRFAANTRR 3
           TILASRFA NTRR
Sbjct: 686 TILASRFAKNTRR 698


>emb|CAN83465.1| hypothetical protein VITISV_038667 [Vitis vinifera]
          Length = 731

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/133 (83%), Positives = 118/133 (88%), Gaps = 3/133 (2%)
 Frame = -3

Query: 392 TLNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 213
           T NLPSSTRTVRAL EVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYS+HWRTWAACF
Sbjct: 571 TQNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACF 630

Query: 212 IQAAWRRYKRRLMAKNLSMRESFSFPTDDQMS---DETEQEEGEKSIGANSSQAKQNLGV 42
           IQAAWRRYK+R+MAKNLSMRESFSF  DD  +   DETEQE+   S  +NSSQAKQ+LGV
Sbjct: 631 IQAAWRRYKKRIMAKNLSMRESFSFADDDDHADDEDETEQEDEGSSTKSNSSQAKQHLGV 690

Query: 41  TILASRFAANTRR 3
           TILASRFA NTRR
Sbjct: 691 TILASRFAKNTRR 703


>ref|XP_002515365.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223545309|gb|EEF46814.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 629

 Score =  213 bits (543), Expect = 1e-53
 Identities = 106/130 (81%), Positives = 118/130 (90%)
 Frame = -3

Query: 392 TLNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 213
           TLNLPSSTRTVRAL EVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTW ACF
Sbjct: 474 TLNLPSSTRTVRALEEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWGACF 533

Query: 212 IQAAWRRYKRRLMAKNLSMRESFSFPTDDQMSDETEQEEGEKSIGANSSQAKQNLGVTIL 33
           IQAAWRR+K+R+MA++L+M ESF++  D+Q++ ET QEE  KS  + SSQAKQNLGVTIL
Sbjct: 534 IQAAWRRHKKRMMARSLTMCESFAYSVDEQVASETTQEESMKS--STSSQAKQNLGVTIL 591

Query: 32  ASRFAANTRR 3
           ASRFAANTRR
Sbjct: 592 ASRFAANTRR 601


>ref|XP_002324941.1| predicted protein [Populus trichocarpa] gi|222866375|gb|EEF03506.1|
           predicted protein [Populus trichocarpa]
          Length = 720

 Score =  210 bits (534), Expect = 1e-52
 Identities = 108/132 (81%), Positives = 117/132 (88%), Gaps = 2/132 (1%)
 Frame = -3

Query: 392 TLNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 213
           TLNLPSSTRTVRAL EVEAFAL+AEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWA CF
Sbjct: 561 TLNLPSSTRTVRALEEVEAFALQAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWATCF 620

Query: 212 IQAAWRRYKRRLMAKNLSMRESFSFPTDDQMS-DETEQEEGEKSIGAN-SSQAKQNLGVT 39
           IQAAWRR+K+R+MAK+LSM ESFS   D Q + DET QEE E S  ++ SSQAKQ+LGVT
Sbjct: 621 IQAAWRRHKKRMMAKSLSMSESFSLSVDGQTADDETTQEEAEPSFASSTSSQAKQHLGVT 680

Query: 38  ILASRFAANTRR 3
           ILASRFAANTRR
Sbjct: 681 ILASRFAANTRR 692


>ref|XP_004173938.1| PREDICTED: probable cyclic nucleotide-gated ion channel 14-like
           [Cucumis sativus]
          Length = 204

 Score =  205 bits (521), Expect = 3e-51
 Identities = 101/131 (77%), Positives = 118/131 (90%), Gaps = 1/131 (0%)
 Frame = -3

Query: 392 TLNLPSSTRTVRALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 213
           +++LPSSTRTVRA+ EVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF
Sbjct: 47  SISLPSSTRTVRAITEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACF 106

Query: 212 IQAAWRRYKRRLMAKNLSMRESFSFPTDDQMSDETEQ-EEGEKSIGANSSQAKQNLGVTI 36
           IQAAWRR+KRR++AK+LS++ESFS   +  +++E EQ EEG  +  ++ SQAKQNLGVTI
Sbjct: 107 IQAAWRRFKRRIIAKSLSLQESFSLTPEKPVAEEAEQEEEGHSTPRSSYSQAKQNLGVTI 166

Query: 35  LASRFAANTRR 3
           LASRFAANTRR
Sbjct: 167 LASRFAANTRR 177


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