BLASTX nr result

ID: Panax21_contig00034357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034357
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75681.1| hypothetical protein VITISV_038954 [Vitis vinifera]    48   3e-09
ref|XP_002283080.1| PREDICTED: mitogen-activated protein kinase ...    48   3e-09
ref|XP_004167489.1| PREDICTED: mitogen-activated protein kinase ...    42   6e-08
ref|XP_004137516.1| PREDICTED: mitogen-activated protein kinase ...    42   6e-08
gb|ACE97588.1| serine/threonine protein kinase [Populus tremula]       41   1e-07

>emb|CAN75681.1| hypothetical protein VITISV_038954 [Vitis vinifera]
          Length = 314

 Score = 48.1 bits (113), Expect(2) = 3e-09
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 GVFQHPSGDVAILMDYMDAGTIWP--RPMVPLY*AMINNVAG*TLMGLEYLHNTK 269
           G+FQ PSGD+AILM+YMDAGT+              +  VAG  L GL YLH+ K
Sbjct: 110 GIFQKPSGDIAILMEYMDAGTLKTLLETQGTFSEVDLAGVAGQVLNGLSYLHSHK 164



 Score = 38.1 bits (87), Expect(2) = 3e-09
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 286 IVYSDIKPSNLLVN*RMQIKITDFEVIK 369
           I++ DIKP+NLLVN  M++KI DF V K
Sbjct: 165 IIHRDIKPANLLVNGNMEVKIADFGVSK 192


>ref|XP_002283080.1| PREDICTED: mitogen-activated protein kinase kinase 5 [Vitis
           vinifera]
          Length = 314

 Score = 47.8 bits (112), Expect(2) = 3e-09
 Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 GVFQHPSGDVAILMDYMDAGTIWP--RPMVPLY*AMINNVAG*TLMGLEYLHNTK 269
           G+FQ PSGD+AILM+YMDAGT+              +  VAG  L GL YLH+ K
Sbjct: 110 GIFQKPSGDIAILMEYMDAGTLKTLLETKGTFSEVDLAGVAGQVLNGLSYLHSHK 164



 Score = 38.1 bits (87), Expect(2) = 3e-09
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 286 IVYSDIKPSNLLVN*RMQIKITDFEVIK 369
           I++ DIKP+NLLVN  M++KI DF V K
Sbjct: 165 IIHRDIKPANLLVNGNMEVKIADFGVSK 192


>ref|XP_004167489.1| PREDICTED: mitogen-activated protein kinase kinase 4-like [Cucumis
           sativus]
          Length = 320

 Score = 42.4 bits (98), Expect(2) = 6e-08
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 GVFQHPSGDVAILMDYMDAGTI--WPRPMVPLY*AMINNVAG*TLMGLEYLHNTK 269
           G+F+ PSGDV ILM+YMD G++    +    L  A + +V+   L GL YLH+ K
Sbjct: 111 GIFEKPSGDVTILMEYMDLGSLDSLLKKNSTLSEATLAHVSRQVLNGLHYLHSHK 165



 Score = 39.3 bits (90), Expect(2) = 6e-08
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 286 IVYSDIKPSNLLVN*RMQIKITDFEVIK 369
           I++ DIKPSNLLVN  M++KI DF V K
Sbjct: 166 IIHRDIKPSNLLVNKNMEVKIADFGVSK 193


>ref|XP_004137516.1| PREDICTED: mitogen-activated protein kinase kinase 4-like [Cucumis
           sativus]
          Length = 320

 Score = 42.4 bits (98), Expect(2) = 6e-08
 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 GVFQHPSGDVAILMDYMDAGTI--WPRPMVPLY*AMINNVAG*TLMGLEYLHNTK 269
           G+F+ PSGDV ILM+YMD G++    +    L  A + +V+   L GL YLH+ K
Sbjct: 111 GIFEKPSGDVTILMEYMDLGSLDSLLKKNSTLSEATLAHVSRQVLNGLHYLHSHK 165



 Score = 39.3 bits (90), Expect(2) = 6e-08
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +1

Query: 286 IVYSDIKPSNLLVN*RMQIKITDFEVIK 369
           I++ DIKPSNLLVN  M++KI DF V K
Sbjct: 166 IIHRDIKPSNLLVNKNMEVKIADFGVSK 193


>gb|ACE97588.1| serine/threonine protein kinase [Populus tremula]
          Length = 142

 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +3

Query: 111 GVFQHPSGDVAILMDYMDAGTI--WPRPMVPLY*AMINNVAG*TLMGLEYLHNTK 269
           GV++ PSGD+AI M+YMD GT+    +       + +++VA   L GL YLH  K
Sbjct: 25  GVYEKPSGDIAITMEYMDLGTLDSLLQKHGTFNESKLSHVASQVLNGLSYLHAQK 79



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +1

Query: 280 KNIVYSDIKPSNLLVN*RMQIKITDFEVIK 369
           + I++ DIKPSNLLVN  M++KI DF V K
Sbjct: 78  QKIIHRDIKPSNLLVNKNMEVKIADFGVSK 107


Top