BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034354
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17575.3| unnamed protein product [Vitis vinifera]              246   3e-63
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...   246   3e-63
ref|XP_002525094.1| pentatricopeptide repeat-containing protein,...   222   5e-56
ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containi...   207   1e-51
ref|XP_003631109.1| Pentatricopeptide repeat-containing protein ...   204   1e-50

>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  246 bits (629), Expect = 3e-63
 Identities = 126/204 (61%), Positives = 157/204 (76%)
 Frame = +3

Query: 6    MMKKNIQLHSDVISTIVEVYSAHCRLDGALLAFEYIVKMGINLKRATYLSLIGASIRTNT 185
            M+ KN +L S +IS I+EV  AHCR++GALLAFEY VKMGIN++R  YL+L+G  IR N+
Sbjct: 453  MIHKNTRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANS 512

Query: 186  FPKVVEIVEEMVRAGHSLGTHLSALLIYRLGCARKAVSAAKIFDLLPDDQKSTTAYTALI 365
            FPKV +IVE+MVRAG SLG +L ALLIYRLGCAR+  SAAK+F LLPDDQK T AYTALI
Sbjct: 513  FPKVADIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALI 572

Query: 366  GAYFSSGNTGKGLKTFELMRSNGIPSAVGTYNVLLADLERSGRVGEVELYRKEKKSLQAA 545
             AYFSSGN  KGLK ++ M+   I  A+GTYN+LLA LE+ GR  E E+YRKEKK+L   
Sbjct: 573  SAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTH 632

Query: 546  IMFQHRLPVEEMICNLLFAGDMVA 617
               Q  + ++E ICNLLF+G++V+
Sbjct: 633  GHSQDIVSMDEKICNLLFSGNLVS 656


>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Vitis vinifera]
          Length = 519

 Score =  246 bits (629), Expect = 3e-63
 Identities = 126/204 (61%), Positives = 157/204 (76%)
 Frame = +3

Query: 6   MMKKNIQLHSDVISTIVEVYSAHCRLDGALLAFEYIVKMGINLKRATYLSLIGASIRTNT 185
           M+ KN +L S +IS I+EV  AHCR++GALLAFEY VKMGIN++R  YL+L+G  IR N+
Sbjct: 316 MIHKNTRLDSVIISQIIEVNCAHCRINGALLAFEYSVKMGINIERIAYLALMGVFIRANS 375

Query: 186 FPKVVEIVEEMVRAGHSLGTHLSALLIYRLGCARKAVSAAKIFDLLPDDQKSTTAYTALI 365
           FPKV +IVE+MVRAG SLG +L ALLIYRLGCAR+  SAAK+F LLPDDQK T AYTALI
Sbjct: 376 FPKVADIVEKMVRAGISLGMYLGALLIYRLGCARRPGSAAKVFGLLPDDQKGTAAYTALI 435

Query: 366 GAYFSSGNTGKGLKTFELMRSNGIPSAVGTYNVLLADLERSGRVGEVELYRKEKKSLQAA 545
            AYFSSGN  KGLK ++ M+   I  A+GTYN+LLA LE+ GR  E E+YRKEKK+L   
Sbjct: 436 SAYFSSGNVDKGLKIYKTMQRKRIHPALGTYNLLLAGLEKKGRAREAEIYRKEKKTLHTH 495

Query: 546 IMFQHRLPVEEMICNLLFAGDMVA 617
              Q  + ++E ICNLLF+G++V+
Sbjct: 496 GHSQDIVSMDEKICNLLFSGNLVS 519


>ref|XP_002525094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535553|gb|EEF37221.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score =  222 bits (566), Expect = 5e-56
 Identities = 115/203 (56%), Positives = 152/203 (74%)
 Frame = +3

Query: 6   MMKKNIQLHSDVISTIVEVYSAHCRLDGALLAFEYIVKMGINLKRATYLSLIGASIRTNT 185
           ++ KN+ L S ++STI+EV  + CR D AL+AFEY +++GI+L+R  YL+LIG  IR+NT
Sbjct: 269 VLDKNMVLESWIVSTIIEVNCSQCRPDSALMAFEYSMRVGIDLERTAYLALIGIMIRSNT 328

Query: 186 FPKVVEIVEEMVRAGHSLGTHLSALLIYRLGCARKAVSAAKIFDLLPDDQKSTTAYTALI 365
              V+EIV+E +R GHSLG +LSALLI+RLG AR+   AAKIFDLLPD+QK T  YTA+I
Sbjct: 329 SLWVLEIVKETIRVGHSLGLYLSALLIHRLGSARRPNCAAKIFDLLPDEQKCTATYTAMI 388

Query: 366 GAYFSSGNTGKGLKTFELMRSNGIPSAVGTYNVLLADLERSGRVGEVELYRKEKKSLQAA 545
           G YFS+G+  K LK ++ M+ N I  ++GTYNVLLA LE+SGRV E + +RKEK+SL A 
Sbjct: 389 GVYFSAGSAAKALKIYKTMKKNSINPSLGTYNVLLAGLEKSGRVCETDNFRKEKRSLMAD 448

Query: 546 IMFQHRLPVEEMICNLLFAGDMV 614
                 LP+EE IC+LLFAG +V
Sbjct: 449 GNRLSCLPMEEKICDLLFAGSLV 471


>ref|XP_003524343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Glycine max]
          Length = 585

 Score =  207 bits (528), Expect = 1e-51
 Identities = 111/205 (54%), Positives = 144/205 (70%), Gaps = 2/205 (0%)
 Frame = +3

Query: 6   MMKKNIQLHSDVISTIVEVYSAHCRLDGALLAFEYIVKMGINLKRATYLSLIGASIRTNT 185
           MM K I L   V+STI+EV  +HCR +GALLAF+Y V MGI+++R  YLSLIG  IR+N 
Sbjct: 380 MMDKKISLDHKVVSTIIEVNCSHCRPEGALLAFKYSVTMGISIERTGYLSLIGLLIRSNM 439

Query: 186 FPKVVEIVEEMVRAGHSLGTHLSALLIYRLGCARKAVSAAKIFDLLPDDQKSTTAYTALI 365
           F K+ EIVE+M RAGHSLG +L++LLI+RLGCARK   A KIF+LLPD+ K +  YTALI
Sbjct: 440 FSKLAEIVEKMTRAGHSLGIYLASLLIFRLGCARKHTLAMKIFNLLPDNHKCSATYTALI 499

Query: 366 GAYFSSGNTGKGLKTFELMRSNGIPSAVGTYNVLLADLERSGRVGEVELYRKEK--KSLQ 539
             YFS     + L+ +++M S G    +GTY+VL+A LER+G+  E E YRK K  KSL+
Sbjct: 500 SVYFSVRRVNEALEIYKIMCSKGFCPVLGTYDVLIAGLERNGKYAEAEHYRKAKKRKSLR 559

Query: 540 AAIMFQHRLPVEEMICNLLFAGDMV 614
           A    Q  + +E  ICNLLF+ D+V
Sbjct: 560 ANSGSQESVCIEGKICNLLFSVDVV 584


>ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355525131|gb|AET05585.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 687

 Score =  204 bits (519), Expect = 1e-50
 Identities = 108/203 (53%), Positives = 139/203 (68%)
 Frame = +3

Query: 6    MMKKNIQLHSDVISTIVEVYSAHCRLDGALLAFEYIVKMGINLKRATYLSLIGASIRTNT 185
            MM K I + + VISTI+EV    CR DGALLAF Y V MGI+++R  YLSL+G   R+N 
Sbjct: 484  MMDKKISVDNKVISTIIEVNCNCCRPDGALLAFNYSVTMGISIERTGYLSLVGLLNRSNM 543

Query: 186  FPKVVEIVEEMVRAGHSLGTHLSALLIYRLGCARKAVSAAKIFDLLPDDQKSTTAYTALI 365
            F K+VEIV EM RAGHSLG +L++LLIYRLGCAR+   A KIF+LLPD+ K    YTALI
Sbjct: 544  FSKLVEIVGEMTRAGHSLGIYLASLLIYRLGCARQLSIALKIFNLLPDNHKCVATYTALI 603

Query: 366  GAYFSSGNTGKGLKTFELMRSNGIPSAVGTYNVLLADLERSGRVGEVELYRKEKKSLQAA 545
              YFS+    K L+ +++M   G     GT+N+L+A LER+GR  E  ++RK KK+L + 
Sbjct: 604  SIYFSARRVNKALEIYKIMCQKGNCPTSGTFNILVAGLERNGRFSEAGVHRKAKKNLNSN 663

Query: 546  IMFQHRLPVEEMICNLLFAGDMV 614
            I  Q  L  E  IC+LLFAGD++
Sbjct: 664  IGSQENLSTEGRICDLLFAGDVI 686