BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034349
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39176.3| unnamed protein product [Vitis vinifera]              271   4e-71
ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containi...   271   4e-71
emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]   271   4e-71
ref|XP_002519389.1| pentatricopeptide repeat-containing protein,...   252   2e-65
ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containi...   244   7e-63

>emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  271 bits (693), Expect = 4e-71
 Identities = 127/161 (78%), Positives = 144/161 (89%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            MVRDGCAPNVVTYTALIHAYLK RK S ANELF++M+SEGCIPN+VT+TALIDGHCKSG+
Sbjct: 541  MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            IEKACQIYARM+G  + PDV++YFK D     +PN+ TYGALVDGLCKAH+V+EAR+LLD
Sbjct: 601  IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
             MS++GCEPNHIVYDALIDGFCKVGKLDEAQ VF KMSE G
Sbjct: 661  VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
 Frame = +3

Query: 24   PNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQI 203
            PN+ TY AL+    K  K  +A +L  VM  EGC PN + + ALIDG CK G++++A  +
Sbjct: 634  PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 204  YARMKGITETPDVNIY-------FKTD--------YSKTME----PNVVTYGALVDGLCK 326
            + +M      P+V  Y       FK           S+ +E    PNV+ Y  ++DGLCK
Sbjct: 694  FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 327  AHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
              + +EA  L+  M  KGC PN + Y A+IDGF K GK+D+  E+  +M   G
Sbjct: 754  VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/159 (33%), Positives = 85/159 (53%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M   G  PNV TY++LI    K+++   A ++   M+   C PN++ +T +IDG CK G+
Sbjct: 697  MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             ++A ++ + M+                 K   PNVVTY A++DG  KA +V++   L+ 
Sbjct: 757  TDEAYRLMSMME----------------EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSE 479
             M  KGC PN + Y  LI+  C  G LD+A ++  +M +
Sbjct: 801  QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M+ + CAPNV+ YT +I    K  K  +A  L  +M  +GC PN+VT+TA+IDG  K+G+
Sbjct: 732  MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            ++K  ++  +M                 +K   PN VTY  L++  C A  +++A  LLD
Sbjct: 792  VDKCLELMRQMG----------------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 363  AMS--------------LKGCEPNHIV-------------------YDALIDGFCKVGKL 443
             M               ++G     I+                   Y  LID FCK G+L
Sbjct: 836  EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895

Query: 444  DEAQEVFVKMSEC 482
            + A E+  +MS C
Sbjct: 896  ELALELHKEMSSC 908



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 59/217 (27%), Positives = 82/217 (37%), Gaps = 60/217 (27%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALI-------- 158
            M+ +GC P+   + +LIHAY +    S A +L + M   GC P  V +  LI        
Sbjct: 360  MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419

Query: 159  ------------------DGH---------------CKSGEIEKACQIYARMKGITETPD 239
                              D H               C +G+ EKA  I   M      PD
Sbjct: 420  LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479

Query: 240  VNIY-------------------FKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             + Y                   F+   S  + P+V TY  L+D  CK   +++AR   D
Sbjct: 480  TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
             M   GC PN + Y ALI  + K  K+  A E+F  M
Sbjct: 540  EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M    C PNVVTY  L+   L++R+      +  +M++EGC P+   F +LI  +C+SG+
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 183 IEKACQIYARMKGITETPDVNIY----------FKTDYSKTMEPNVVTYGALVDG----- 317
              A ++  +M      P   +Y           K      +E     YG ++D      
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 318 ----------LCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFV 467
                     LC A + E+A +++  M  KG  P+   Y  +I   C   K+D A  +F 
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504

Query: 468 KM 473
           +M
Sbjct: 505 EM 506



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
 Frame = +3

Query: 15  GCAPNVVTYTALIH----------AYLKERKASDAN----------------------EL 98
           G  P+ +TY AL+           AYL  R+ SD+                       E 
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 99  FQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQIYARMKGITETPDVNIYFKTDYSKTM 278
             ++  E    + V +T +I G C++   E+A    +RM+                S + 
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMR----------------SSSC 330

Query: 279 EPNVVTYGALVDGLCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQE 458
            PNVVTY  L+ G  +  ++   + +L  M  +GC P+  ++++LI  +C+ G    A +
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 459 VFVKMSECG 485
           +  KM +CG
Sbjct: 391 LLKKMGDCG 399


>ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
            mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  271 bits (693), Expect = 4e-71
 Identities = 127/161 (78%), Positives = 144/161 (89%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            MVRDGCAPNVVTYTALIHAYLK RK S ANELF++M+SEGCIPN+VT+TALIDGHCKSG+
Sbjct: 541  MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            IEKACQIYARM+G  + PDV++YFK D     +PN+ TYGALVDGLCKAH+V+EAR+LLD
Sbjct: 601  IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
             MS++GCEPNHIVYDALIDGFCKVGKLDEAQ VF KMSE G
Sbjct: 661  VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
 Frame = +3

Query: 24   PNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQI 203
            PN+ TY AL+    K  K  +A +L  VM  EGC PN + + ALIDG CK G++++A  +
Sbjct: 634  PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 204  YARMKGITETPDVNIY-------FKTD--------YSKTME----PNVVTYGALVDGLCK 326
            + +M      P+V  Y       FK           S+ +E    PNV+ Y  ++DGLCK
Sbjct: 694  FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 327  AHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
              + +EA  L+  M  KGC PN + Y A+IDGF K GK+D+  E+  +M   G
Sbjct: 754  VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/159 (33%), Positives = 85/159 (53%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M   G  PNV TY++LI    K+++   A ++   M+   C PN++ +T +IDG CK G+
Sbjct: 697  MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             ++A ++ + M+                 K   PNVVTY A++DG  KA +V++   L+ 
Sbjct: 757  TDEAYRLMSMME----------------EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSE 479
             M  KGC PN + Y  LI+  C  G LD+A ++  +M +
Sbjct: 801  QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 33/193 (17%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M+ + CAPNV+ YT +I    K  K  +A  L  +M  +GC PN+VT+TA+IDG  K+G+
Sbjct: 732  MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            ++K  ++  +M                 +K   PN VTY  L++  C A  +++A  LLD
Sbjct: 792  VDKCLELMRQMG----------------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 363  AMS--------------LKGCEPNHIV-------------------YDALIDGFCKVGKL 443
             M               ++G     I+                   Y  LID FCK G+L
Sbjct: 836  EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895

Query: 444  DEAQEVFVKMSEC 482
            + A E+  +MS C
Sbjct: 896  ELALELHKEMSSC 908



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 59/217 (27%), Positives = 82/217 (37%), Gaps = 60/217 (27%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALI-------- 158
            M+ +GC P+   + +LIHAY +    S A +L + M   GC P  V +  LI        
Sbjct: 360  MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419

Query: 159  ------------------DGH---------------CKSGEIEKACQIYARMKGITETPD 239
                              D H               C +G+ EKA  I   M      PD
Sbjct: 420  LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479

Query: 240  VNIY-------------------FKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             + Y                   F+   S  + P+V TY  L+D  CK   +++AR   D
Sbjct: 480  TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
             M   GC PN + Y ALI  + K  K+  A E+F  M
Sbjct: 540  EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M    C PNVVTY  L+   L++R+      +  +M++EGC P+   F +LI  +C+SG+
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 183 IEKACQIYARMKGITETPDVNIY----------FKTDYSKTMEPNVVTYGALVDG----- 317
              A ++  +M      P   +Y           K      +E     YG ++D      
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 318 ----------LCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFV 467
                     LC A + E+A +++  M  KG  P+   Y  +I   C   K+D A  +F 
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504

Query: 468 KM 473
           +M
Sbjct: 505 EM 506



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
 Frame = +3

Query: 15  GCAPNVVTYTALIH----------AYLKERKASDAN----------------------EL 98
           G  P+ +TY AL+           AYL  R+ SD+                       E 
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 99  FQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQIYARMKGITETPDVNIYFKTDYSKTM 278
             ++  E    + V +T +I G C++   E+A    +RM+                S + 
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMR----------------SSSC 330

Query: 279 EPNVVTYGALVDGLCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQE 458
            PNVVTY  L+ G  +  ++   + +L  M  +GC P+  ++++LI  +C+ G    A +
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 459 VFVKMSECG 485
           +  KM +CG
Sbjct: 391 LLKKMGDCG 399


>emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  271 bits (693), Expect = 4e-71
 Identities = 127/161 (78%), Positives = 144/161 (89%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            MVRDGCAPNVVTYTALIHAYLK RK S ANELF++M+SEGCIPN+VT+TALIDGHCKSG+
Sbjct: 541  MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            IEKACQIYARM+G  + PDV++YFK D     +PN+ TYGALVDGLCKAH+V+EAR+LLD
Sbjct: 601  IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
             MS++GCEPNHIVYDALIDGFCKVGKLDEAQ VF KMSE G
Sbjct: 661  VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERG 701



 Score =  118 bits (296), Expect = 4e-25
 Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 19/173 (10%)
 Frame = +3

Query: 24   PNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQI 203
            PN+ TY AL+    K  K  +A +L  VM  EGC PN + + ALIDG CK G++++A  +
Sbjct: 634  PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 204  YARMKGITETPDVNIY-------FKTD--------YSKTME----PNVVTYGALVDGLCK 326
            + +M      P+V  Y       FK           S+ +E    PNV+ Y  ++DGLCK
Sbjct: 694  FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 327  AHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
              + +EA  L+  M  KGC PN + Y A+IDGF K GK+D+  E+  +M   G
Sbjct: 754  VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806



 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/159 (33%), Positives = 85/159 (53%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M   G  PNV TY++LI    K+++   A ++   M+   C PN++ +T +IDG CK G+
Sbjct: 697  MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             ++A ++ + M+                 K   PNVVTY A++DG  KA +V++   L+ 
Sbjct: 757  TDEAYRLMSMME----------------EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMR 800

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSE 479
             M  KGC PN + Y  LI+  C  G LD+A ++  +M +
Sbjct: 801  QMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQ 839



 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M+ + CAPNV+ YT +I    K  K  +A  L  +M  +GC PN+VT+TA+IDG  K+G+
Sbjct: 732  MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGK 791

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            ++K  ++  +M                 +K   PN VTY  L++  C A  +++A  LLD
Sbjct: 792  VDKCLELMRQMG----------------AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 363  AMS--------------LKGCEPNHIV-------------------YDALIDGFCKVGKL 443
             M               ++G     I+                   Y  LID FCK G+L
Sbjct: 836  EMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRL 895

Query: 444  DEAQEVFVKMSEC 482
            + A E+   MS C
Sbjct: 896  ELALELHKXMSSC 908



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 59/217 (27%), Positives = 82/217 (37%), Gaps = 60/217 (27%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALI-------- 158
            M+ +GC P+   + +LIHAY +    S A +L + M   GC P  V +  LI        
Sbjct: 360  MITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEK 419

Query: 159  ------------------DGH---------------CKSGEIEKACQIYARMKGITETPD 239
                              D H               C +G+ EKA  I   M      PD
Sbjct: 420  LPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPD 479

Query: 240  VNIY-------------------FKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             + Y                   F+   S  + P+V TY  L+D  CK   +++AR   D
Sbjct: 480  TSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD 539

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
             M   GC PN + Y ALI  + K  K+  A E+F  M
Sbjct: 540  EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 25/182 (13%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M    C PNVVTY  L+   L++R+      +  +M++EGC P+   F +LI  +C+SG+
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 183 IEKACQIYARMKGITETPDVNIY----------FKTDYSKTMEPNVVTYGALVDG----- 317
              A ++  +M      P   +Y           K      +E     YG ++D      
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444

Query: 318 ----------LCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFV 467
                     LC A + E+A +++  M  KG  P+   Y  +I   C   K+D A  +F 
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504

Query: 468 KM 473
           +M
Sbjct: 505 EM 506



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
 Frame = +3

Query: 15  GCAPNVVTYTALIH----------AYLKERKASDAN----------------------EL 98
           G  P+ +TY AL+           AYL  R+ SD+                       E 
Sbjct: 227 GYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREA 286

Query: 99  FQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQIYARMKGITETPDVNIYFKTDYSKTM 278
             ++  E    + V +T +I G C++   E+A    +RM+                S + 
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMR----------------SSSC 330

Query: 279 EPNVVTYGALVDGLCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQE 458
            PNVVTY  L+ G  +  ++   + +L  M  +GC P+  ++++LI  +C+ G    A +
Sbjct: 331 IPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYK 390

Query: 459 VFVKMSECG 485
           +  KM +CG
Sbjct: 391 LLKKMGDCG 399


>ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541456|gb|EEF43006.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 634

 Score =  252 bits (644), Expect = 2e-65
 Identities = 121/158 (76%), Positives = 139/158 (87%), Gaps = 1/158 (0%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M +DGCAPNVVTYTALIHAYLK RK S ANE+F++M+S GC+PNIVT+TALIDGHCK+GE
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 183 IEKACQIYARMKGI-TETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLL 359
            EKACQIYARMK    + PDV+IYF+   S+  EPNVVTYGALVDGLCKAH+V+EAR+LL
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 360 DAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
           + MSL+GCEPN I+YDALIDGFCKVGKLDEAQEVF KM
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340



 Score =  120 bits (300), Expect = 1e-25
 Identities = 68/173 (39%), Positives = 96/173 (55%), Gaps = 19/173 (10%)
 Frame = +3

Query: 24  PNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQI 203
           PNVVTY AL+    K  K  +A +L + M  EGC PN + + ALIDG CK G++++A ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 204 YARMKGITETPDVNIY-------FKTD--------YSKTME----PNVVTYGALVDGLCK 326
           + +M G   +P+V  Y       FK           +K +E    PNVV Y  +VDGLCK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 327 AHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
             + +EA  L+  M  KGC PN + Y A+IDGF K G++D   E+   M+  G
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449



 Score =  111 bits (277), Expect = 7e-23
 Identities = 65/178 (36%), Positives = 93/178 (52%), Gaps = 19/178 (10%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M  +GC PN + Y ALI  + K  K  +A E+F  M+  GC PN+ T+++LID   K   
Sbjct: 305 MSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKR 364

Query: 183 IEKACQIYARMKGITETPDVNIYF----------KTDYS---------KTMEPNVVTYGA 305
           ++ A ++  +M   +  P+V IY           KTD +         K   PNVVTY A
Sbjct: 365 LDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTA 424

Query: 306 LVDGLCKAHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSE 479
           ++DG  KA RV+    LL  M+ KGC PN I Y  LI+  C  G LD+A ++  +M +
Sbjct: 425 MIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M+ + CAPNVV YT ++    K  K  +A  L  +M  +GC PN+VT+TA+IDG  K+G 
Sbjct: 375 MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGR 434

Query: 183 IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
           +++  ++   M                 SK   PN +TY  L++  C A  +++A  LL+
Sbjct: 435 VDRCLELLQLMT----------------SKGCAPNFITYRVLINHCCAAGLLDDAHKLLE 478

Query: 363 AM---------------------------------SLKGCEPNHIVYDALIDGFCKVGKL 443
            M                                 S  G  P   VY  LID F K G+L
Sbjct: 479 EMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRL 538

Query: 444 DEAQEVFVKMS 476
           + A E+  ++S
Sbjct: 539 EMALELHEELS 549



 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 52/153 (33%), Positives = 74/153 (48%)
 Frame = +3

Query: 27  NVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQIY 206
           NV  +T  +    K  KA +   + + M+S+G IP+  T++ +I   C + ++EKA Q++
Sbjct: 89  NVCNFTRCLCCIGKFEKAYN---VIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLF 145

Query: 207 ARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLDAMSLKGCE 386
             MK    TPDV                 TY  L+D  CK   +E+ARN  D M   GC 
Sbjct: 146 QEMKRNGITPDV----------------YTYTTLLDRFCKVGLIEQARNWFDEMQQDGCA 189

Query: 387 PNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
           PN + Y ALI  + K  KL  A E+F  M   G
Sbjct: 190 PNVVTYTALIHAYLKTRKLSRANEIFEMMLSNG 222


>ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  244 bits (622), Expect = 7e-63
 Identities = 114/161 (70%), Positives = 136/161 (84%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
           M+RD C PNVVTYT+LIHAYLK RK  DAN+LF++M+ EG  PN+VT+TALIDGHCK+G+
Sbjct: 514 MLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQ 573

Query: 183 IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
           I+KACQIYARM+G  E+ D+++YFK D +    PN++TYGALVDGLCKA+RVEEA  LLD
Sbjct: 574 IDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLD 633

Query: 363 AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
            MS+ GCEPN IVYDALIDGFCK GKL+ AQEVFVKMSE G
Sbjct: 634 TMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERG 674



 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/173 (37%), Positives = 94/173 (54%), Gaps = 19/173 (10%)
 Frame = +3

Query: 24   PNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKACQI 203
            PN++TY AL+    K  +  +A+EL   M   GC PN + + ALIDG CK+G++E A ++
Sbjct: 607  PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 204  YARMKGITETPD-------VNIYFKTD--------YSKTME----PNVVTYGALVDGLCK 326
            + +M      P+       +N  FK           SK +E    PNVV Y  ++DGLCK
Sbjct: 667  FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 327  AHRVEEARNLLDAMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
              + EEA  L+  M   GC PN I Y A+IDGF K+GK+++  E++  M   G
Sbjct: 727  VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779



 Score =  102 bits (254), Expect = 3e-20
 Identities = 55/159 (34%), Positives = 85/159 (53%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M   G  PN+ TY++LI++  KE++     ++   M+   C PN+V +T +IDG CK G+
Sbjct: 670  MSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGK 729

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
             E+A ++  +M+      +V  Y          PNV+TY A++DG  K  ++E+   L  
Sbjct: 730  TEEAYRLMLKME------EVGCY----------PNVITYTAMIDGFGKIGKIEQCLELYR 773

Query: 363  AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSE 479
             M  KGC PN I Y  LI+  C  G LDEA  +  +M +
Sbjct: 774  DMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQ 812



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
 Frame = +3

Query: 3    MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGE 182
            M+ + C PNVV YT +I    K  K  +A  L   M   GC PN++T+TA+IDG  K G+
Sbjct: 705  MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764

Query: 183  IEKACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLD 362
            IE+  ++Y  M                 SK   PN +TY  L++  C    ++EA  LLD
Sbjct: 765  IEQCLELYRDM----------------CSKGCAPNFITYRVLINHCCSTGLLDEAHRLLD 808

Query: 363  AMSLKGCEPNHI-VYDALIDGF-----CKVGKLDEAQE 458
             M  +   P HI  Y  +I+GF       +G LDE  E
Sbjct: 809  EMK-QTYWPRHISSYRKIIEGFNREFITSIGLLDELSE 845



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 60/217 (27%)
 Frame = +3

Query: 3   MVRDGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKS-- 176
           M+ +GC PN   + +L+HAY K R  S A +LF+ M+  GC P  + +   I   C +  
Sbjct: 333 MMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEE 392

Query: 177 ---------------------------------------GEIEKACQIYARMKGITETPD 239
                                                  G+ +KA +I   M      PD
Sbjct: 393 LPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPD 452

Query: 240 VNIYFKT-----DYSKTME--------------PNVVTYGALVDGLCKAHRVEEARNLLD 362
            + Y K      D SK  +              P+V TY  L+D  CKA  +++ARN  D
Sbjct: 453 DSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFD 512

Query: 363 AMSLKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
            M    C PN + Y +LI  + K  K+ +A ++F  M
Sbjct: 513 EMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMM 549



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
 Frame = +3

Query: 15   GCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEKA 194
            GC PNV+TYTA+I  + K  K     EL++ M S+GC PN +T+  LI+  C +G +++A
Sbjct: 744  GCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEA 803

Query: 195  CQIYARMKGITETPDVNIYFKTDYSKTME-----------------PNVVTYGALVDGLC 323
             ++   MK       ++ Y K       E                 P    Y  L+D   
Sbjct: 804  HRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFI 863

Query: 324  KAHRVEEARNLLDAMSLKG--CEPNHIVYDALIDGFCKVGKLDEAQEVFVKM 473
            KA R+E A NLL+ +S        N  +Y +LI+      K+D+A E++  M
Sbjct: 864  KAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASM 915



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/158 (24%), Positives = 69/158 (43%)
 Frame = +3

Query: 12  DGCAPNVVTYTALIHAYLKERKASDANELFQVMVSEGCIPNIVTFTALIDGHCKSGEIEK 191
           DGC      Y+          KA    +   ++  E  +P+ V +  ++ G C++   ++
Sbjct: 239 DGCTLGCFAYSLC--------KAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASLFQE 290

Query: 192 ACQIYARMKGITETPDVNIYFKTDYSKTMEPNVVTYGALVDGLCKAHRVEEARNLLDAMS 371
           A  I  RM+ I+                  PNVVTY  L+ G     ++   + +L  M 
Sbjct: 291 AMDILDRMRSIS----------------CIPNVVTYRILLSGCLGKGQLGRCKRILSMMM 334

Query: 372 LKGCEPNHIVYDALIDGFCKVGKLDEAQEVFVKMSECG 485
            +GC PN  ++++L+  +CK      A ++F KM +CG
Sbjct: 335 TEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG 372