BLASTX nr result

ID: Panax21_contig00034337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034337
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [...   193   1e-47
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza...   181   5e-44
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo...   181   5e-44
ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [S...   173   1e-41
ref|XP_003575325.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l...   163   1e-38

>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago
           truncatula]
          Length = 1116

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/148 (62%), Positives = 111/148 (75%), Gaps = 3/148 (2%)
 Frame = -1

Query: 439 ENFPFGE-DCS--ISNARELRLGDGDAEALCIYFHRMQSRNSNFFYMIDVDDECRIRNVF 269
           +N  FGE DC   I  AR LRLG GDAEA+  YF RMQ +NS F+Y++DVDD+ R+RNVF
Sbjct: 496 DNLTFGEKDCRNYIDKARRLRLGTGDAEAIQNYFVRMQKKNSQFYYVMDVDDKSRLRNVF 555

Query: 268 WADARCRSAYESFGDVVLFDTTYLTKSYDMPLAPLVGVNHHGHYILFGCGLLSSKNTNTF 89
           W DARCR+AYE FG+V+ FDTTYLT  YDMP AP VGVNHHG  +L GC LLS+++T TF
Sbjct: 556 WVDARCRAAYEYFGEVITFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSNEDTKTF 615

Query: 88  VWLFKALSTCMLGRSPKAVITDQCKDMQ 5
            WLFK    CM GR+P A+ITDQ + M+
Sbjct: 616 SWLFKTWLECMHGRAPNAIITDQDRAMK 643


>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
           Group]
          Length = 862

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = -1

Query: 439 ENFPFGE-DCS--ISNARELRLGDGDAEALCIYFHRMQSRNSNFFYMIDVDDECRIRNVF 269
           EN  FGE +C   + + R+L+LG GDA A+  YF RM S++ NFFY++DVD++ R++NV 
Sbjct: 167 ENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDSRLKNVL 226

Query: 268 WADARCRSAYESFGDVVLFDTTYLTKSYDMPLAPLVGVNHHGHYILFGCGLLSSKNTNTF 89
           W DAR R+ YESF DVV FDTTYLT  Y MP AP VGVNHHG  +L GC LLS++ T TF
Sbjct: 227 WVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEETETF 286

Query: 88  VWLFKALSTCMLGRSPKAVITDQCKDMQ 5
           VWLF++  +CM  ++P A+ITDQC+ MQ
Sbjct: 287 VWLFRSWLSCMSNKAPNAIITDQCRAMQ 314


>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
          Length = 965

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/148 (56%), Positives = 109/148 (73%), Gaps = 3/148 (2%)
 Frame = -1

Query: 439 ENFPFGE-DCS--ISNARELRLGDGDAEALCIYFHRMQSRNSNFFYMIDVDDECRIRNVF 269
           EN  FGE +C   + + R+L+LG GDA A+  YF RM S++ NFFY++DVD++ R++NV 
Sbjct: 167 ENLQFGEKECRNYLQDVRKLKLGAGDAHAVYQYFLRMTSKDPNFFYVMDVDEDSRLKNVL 226

Query: 268 WADARCRSAYESFGDVVLFDTTYLTKSYDMPLAPLVGVNHHGHYILFGCGLLSSKNTNTF 89
           W DAR R+ YESF DVV FDTTYLT  Y MP AP VGVNHHG  +L GC LLS++ T TF
Sbjct: 227 WVDARSRATYESFSDVVTFDTTYLTNKYHMPFAPFVGVNHHGESVLLGCALLSNEETETF 286

Query: 88  VWLFKALSTCMLGRSPKAVITDQCKDMQ 5
           VWLF++  +CM  ++P A+ITDQC+ MQ
Sbjct: 287 VWLFRSWLSCMSNKAPNAIITDQCRAMQ 314


>ref|XP_002461440.1| hypothetical protein SORBIDRAFT_02g002703 [Sorghum bicolor]
           gi|241924817|gb|EER97961.1| hypothetical protein
           SORBIDRAFT_02g002703 [Sorghum bicolor]
          Length = 614

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/148 (56%), Positives = 103/148 (69%), Gaps = 3/148 (2%)
 Frame = -1

Query: 439 ENFPFGEDCSISNARE---LRLGDGDAEALCIYFHRMQSRNSNFFYMIDVDDECRIRNVF 269
           EN   GE+    N++E   L+    D   L  YF RMQS+N NFFY +D D+  R+RNVF
Sbjct: 122 ENPQLGENECTDNSKEETRLKFSAEDTHVLYQYFFRMQSKNPNFFYAMDFDENSRLRNVF 181

Query: 268 WADARCRSAYESFGDVVLFDTTYLTKSYDMPLAPLVGVNHHGHYILFGCGLLSSKNTNTF 89
           WADAR R+AYESF DVV FD  YLT  Y++PLA  VGVNHHG  IL GCGLLS++NT +F
Sbjct: 182 WADARSRAAYESFSDVVKFDAAYLTSKYEVPLASFVGVNHHGEPILLGCGLLSNQNTESF 241

Query: 88  VWLFKALSTCMLGRSPKAVITDQCKDMQ 5
           VWLFK+L  CM  + PK +ITDQC ++Q
Sbjct: 242 VWLFKSLLACMSYKPPKGLITDQCDEVQ 269


>ref|XP_003575325.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Brachypodium
           distachyon]
          Length = 811

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/148 (52%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
 Frame = -1

Query: 439 ENFPFGEDC--SISNARELRLGDGDAEALCIYFHRMQSRNSNFFYMIDVDDECRIRNVFW 266
           E   FGE    S      L+L  GD+EAL ++F RMQ++N+NFF +ID+DDE  +RNVFW
Sbjct: 182 EELLFGESKHNSFVERGRLKLQPGDSEALRLFFTRMQAKNANFFNVIDMDDEGCVRNVFW 241

Query: 265 ADARCRSAYESFGDVVLFDTTYLTKSYDMPLAPLVGVNHHGHYILFGCGLLSSKNTNTFV 86
           ADAR R+ YE + D +  DT+Y+   YDMPL   +GVNHHG  IL GCGLLS +   T+ 
Sbjct: 242 ADARTRAMYEYYNDAITLDTSYVVSKYDMPLVTFLGVNHHGQSILLGCGLLSDETVETYT 301

Query: 85  WLFKALSTCMLGRSPKAVITDQCKDMQA 2
           WLFK    CM G  PKA+ITDQC+ +Q+
Sbjct: 302 WLFKVWVACMSGNLPKAIITDQCRGIQS 329


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