BLASTX nr result
ID: Panax21_contig00034325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00034325 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|2... 144 7e-33 ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera... 138 5e-31 ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi... 135 3e-30 emb|CBI28427.3| unnamed protein product [Vitis vinifera] 130 1e-28 ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max] 122 4e-26 >ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|222861964|gb|EEE99506.1| predicted protein [Populus trichocarpa] Length = 153 Score = 144 bits (363), Expect = 7e-33 Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 3/105 (2%) Frame = -2 Query: 307 KQKRLKFHINDHIDVLIEILKRLDGRSLSVAASVCRLWCSITRNDSLWEHLCFRQM-XXX 131 K+KR KF INDH+D+L+EILKRLDGRSL V+A VCRLWC+I RNDSLWEHLCFR + Sbjct: 6 KEKRPKFCINDHVDILLEILKRLDGRSLCVSACVCRLWCTIARNDSLWEHLCFRHVSPPP 65 Query: 130 XXXXXXXXVALGGYRRLYMLCVRPVLSRLGRQR--GESDLVRRVW 2 VALGGY+RLYM+CVRPVLSRLGR R G+SD VRRVW Sbjct: 66 SSGVRPVVVALGGYKRLYMVCVRPVLSRLGRLRLAGDSDRVRRVW 110 >ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera] gi|147772267|emb|CAN67350.1| hypothetical protein VITISV_018090 [Vitis vinifera] Length = 170 Score = 138 bits (347), Expect = 5e-31 Identities = 70/116 (60%), Positives = 83/116 (71%), Gaps = 9/116 (7%) Frame = -2 Query: 322 MPHEHKQKRLKFHINDHIDVLIEILKRLDGRSLSVAASVCRLWCSITRNDSLWEHLCFRQ 143 M H K+K+ +F IND+ D+L+EILKRLDGRSL VAA VCRLW S+T NDSLWEHLCFR Sbjct: 14 MGHGEKEKKPRFFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRH 73 Query: 142 MXXXXXXXXXXXVALGGYRRLYMLCVRPVLSRLGRQR---------GESDLVRRVW 2 + VALGGYRRLYM+C+RPVLSRLG+ + G+SDLV RVW Sbjct: 74 VSPPPPGVRPVVVALGGYRRLYMMCLRPVLSRLGQMKRGLGGSGGGGDSDLVGRVW 129 >ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis] gi|223530272|gb|EEF32172.1| F-box protein SNE, putative [Ricinus communis] Length = 155 Score = 135 bits (341), Expect = 3e-30 Identities = 69/107 (64%), Positives = 80/107 (74%), Gaps = 6/107 (5%) Frame = -2 Query: 304 QKRLKFHINDHIDVLIEILKRLDGRSLSVAASVCRLWCSITRNDSLWEHLCFRQ-MXXXX 128 QKR KF INDH+D+L+EILKRLDGRSL VAA VC LWC+I RNDSLWE+LCFR + Sbjct: 8 QKRHKFSINDHVDILVEILKRLDGRSLGVAACVCNLWCTIARNDSLWENLCFRHVISPPP 67 Query: 127 XXXXXXXVALGGYRRLYMLCVRPVLSRLGRQ-----RGESDLVRRVW 2 VALGGY+RLYM+CVRPVLS+LGR+ GESD RR+W Sbjct: 68 SGVRPVIVALGGYKRLYMVCVRPVLSQLGRRFRLSSGGESDRARRMW 114 >emb|CBI28427.3| unnamed protein product [Vitis vinifera] Length = 1221 Score = 130 bits (327), Expect = 1e-28 Identities = 70/120 (58%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Frame = -2 Query: 388 SLRTL-FATFKNMLQLYENEQLIMPHEHKQKRLKFHINDHIDVLIEILKRLDGRSLSVAA 212 SLRTL F L Q M H K+K+ +F IND+ D+L+EILKRLDGRSL VAA Sbjct: 1073 SLRTLSFCITMVQLLCRSKFQRGMGHGEKEKKPRFFINDNTDILMEILKRLDGRSLGVAA 1132 Query: 211 SVCRLWCSITRNDSLWEHLCFRQMXXXXXXXXXXXVALGGYRRLYMLCVRPVLSRLGRQR 32 VCRLW S+T NDSLWEHLCFR + VALGGYRRLYM+C+RPVLSRLG+ + Sbjct: 1133 CVCRLWRSVTWNDSLWEHLCFRHVSPPPPGVRPVVVALGGYRRLYMMCLRPVLSRLGQMK 1192 >ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max] Length = 154 Score = 122 bits (305), Expect = 4e-26 Identities = 69/115 (60%), Positives = 82/115 (71%), Gaps = 6/115 (5%) Frame = -2 Query: 328 LIMPHEHK---QKRLKFHINDHIDVLIEILKRLDGRSLSVAASVCRLWCSITRN-DSLWE 161 ++ +H+ +KR +F IND+ID+L EILKRLDG SL VAA VCRLWCS+TRN DSLWE Sbjct: 1 MVQQQQHRREQEKRPRFFINDNIDILREILKRLDGPSLGVAACVCRLWCSLTRNDDSLWE 60 Query: 160 HLCFRQM-XXXXXXXXXXXVALGGYRRLYMLCVRPVLSRLGRQRGESDLVR-RVW 2 HLCFR + VALGGY+RLYM+CVRPVLSRL G S+ VR RVW Sbjct: 61 HLCFRHVSSPPTASVRAVVVALGGYKRLYMVCVRPVLSRL----GNSERVRKRVW 111