BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00034302
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    69   2e-10
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    67   5e-10
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                69   1e-09
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    62   6e-09
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    65   8e-09

>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 68.6 bits (166), Expect(2) = 2e-10
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +1

Query: 118 SSDFSVTIGLHSFD-IEYYLFALVLNELRKDIQDEVL*CLLFADDIVLNYGFRTFVNTNL 294
           + DF + IGLH    +  YLF LV++E+ +DIQ ++  C+LFADD+VL    RT VN  L
Sbjct: 270 TDDFPIKIGLHQGSALSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKL 329

Query: 295 EIWRITSKCMGFILSRSLT 351
           E+WR   +  GF LSR+ T
Sbjct: 330 ELWRQILESKGFRLSRTKT 348



 Score = 22.3 bits (46), Expect(2) = 2e-10
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 386 VGTKSQKVPKMDVLIYLGSIILK 454
           V    Q VP+ D   YLGS++ K
Sbjct: 367 VSLDGQVVPQKDTFRYLGSMLQK 389


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 67.4 bits (163), Expect(2) = 5e-10
 Identities = 37/79 (46%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +1

Query: 118 SSDFSVTIGLHSFD-IEYYLFALVLNELRKDIQDEVL*CLLFADDIVLNYGFRTFVNTNL 294
           + DF + IGLH    +   LF LV++E+ +DIQ ++  C+LFADD+VL    RT VN  L
Sbjct: 10  TDDFPIKIGLHQGSALSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKL 69

Query: 295 EIWRITSKCMGFILSRSLT 351
           E+WR T +  GF LSR+ T
Sbjct: 70  ELWRQTLESKGFRLSRTKT 88



 Score = 22.3 bits (46), Expect(2) = 5e-10
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 386 VGTKSQKVPKMDVLIYLGSIILK 454
           V    Q VP+ D   YLGS++ K
Sbjct: 107 VSLDGQVVPQKDTFRYLGSMLQK 129


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = +1

Query: 118 SSDFSVTIGLHSFDI-EYYLFALVLNELRKDIQDEVL*CLLFADDIVLNYGFRTFVNTNL 294
           S  F V IGLH   +   +LFALV++EL + IQ+ V  C+LFADDIVL    R  VN  L
Sbjct: 396 SEHFPVEIGLHQGSVLSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRVNARL 455

Query: 295 EIWRITSKCMGFILSRSLT 351
           E+WR T +  GF LSR+ T
Sbjct: 456 EVWRQTLESKGFRLSRTKT 474


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 61.6 bits (148), Expect(2) = 6e-09
 Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = +1

Query: 118 SSDFSVTIGLHS-FDIEYYLFALVLNELRKDIQDEVL*CLLFADDIVLNYGFRTFVNTNL 294
           +  F +T+GLH    +  YLFALV++EL   IQD++  C+LFA DIVL    +  VN  L
Sbjct: 356 TESFPITVGLHQGSSLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKL 415

Query: 295 EIWRITSKCMGFILSRSLT 351
            +WR   +  G  LSRS T
Sbjct: 416 NLWREVLESKGLCLSRSKT 434



 Score = 24.3 bits (51), Expect(2) = 6e-09
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 10/38 (26%)
 Frame = +2

Query: 371 MHCKYVGTKSQ----------KVPKMDVLIYLGSIILK 454
           M CK+    SQ          ++PK D   YLGSI+ K
Sbjct: 437 MECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQK 474


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +1

Query: 115 TSSDFSVTIGLHSFD-IEYYLFALVLNELRKDIQDEVL*CLLFADDIVLNYGFRTFVNTN 291
           T+ DF +TIGLH    +  YLF LVL+ L + IQ+    C+LFADD+VL    R  VN  
Sbjct: 333 TTEDFPITIGLHQGSTLTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGR 392

Query: 292 LEIWRITSKCMGFILSRSLTMQEE 363
           LE WR   +  GF LSRS T   E
Sbjct: 393 LETWRQALEAYGFRLSRSKTKYME 416